RAPD marker in grapevine (Vitis spp) similar to plant retrotransposons

被引:23
作者
Böhm, A [1 ]
Zyprian, E [1 ]
机构
[1] Fed Ctr Breeding Res Cultivated Plants, Inst Grapevine Breeding Geilweilerhof, D-76833 Siebeldingen, Germany
关键词
RAPD-PCR; DNA-sequencing; Vitis vinifera L; retrotransposon-like sequence;
D O I
10.1007/s002990050417
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
When assaying for sequence heterogeneity within monomorphic RAPD-PCR products in grapevines (Vitis spp.), we observed partial digestibility of a marker with the restriction enzyme MspI. The degree of digestion varied reproducibly between different cultivars. To study this phenomenon, two of the amplification products were cloned and sequenced. They show 91.7% similarity to each other. The DNA analysed was found to possess high similarity to retrotransposons from higher plants. This element seems repetitive and dispersed throughout the genome. To our knowledge, this is the first report of retrotransposon-like elements in woody plants.
引用
收藏
页码:415 / 421
页数:7
相关论文
共 34 条
[31]   FINGERPRINTING GENOMES USING PCR WITH ARBITRARY PRIMERS [J].
WELSH, J ;
MCCLELLAND, M .
NUCLEIC ACIDS RESEARCH, 1990, 18 (24) :7213-7218
[32]   DNA POLYMORPHISMS AMPLIFIED BY ARBITRARY PRIMERS ARE USEFUL AS GENETIC-MARKERS [J].
WILLIAMS, JGK ;
KUBELIK, AR ;
LIVAK, KJ ;
RAFALSKI, JA ;
TINGEY, SV .
NUCLEIC ACIDS RESEARCH, 1990, 18 (22) :6531-6535
[33]   SEQUENCE-SPECIFIC POLYMERASE CHAIN-REACTION MARKERS DERIVED FROM RANDOMLY AMPLIFIED POLYMORPHIC DNA MARKERS FOR FINGERPRINTING GRAPE (VITIS) ROOTSTOCKS [J].
XU, H ;
WILSON, DJ ;
ARULSEKAR, S ;
BAKALINSKY, AT .
JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 1995, 120 (05) :714-720
[34]   IMPROVED M13 PHAGE CLONING VECTORS AND HOST STRAINS - NUCLEOTIDE-SEQUENCES OF THE M13MP18 AND PUC19 VECTORS [J].
YANISCHPERRON, C ;
VIEIRA, J ;
MESSING, J .
GENE, 1985, 33 (01) :103-119