The use of carbon thirteen nuclear magnetic resonance spectra to predict dioxin and furan binding affinities to the aryl hydrocarbon receptor

被引:8
作者
Shade, L [1 ]
Beger, RD [1 ]
Wilkes, JG [1 ]
机构
[1] US FDA, Natl Ctr Toxicol Res, Div Chem, Jefferson, AR 72079 USA
关键词
spectroscopic data-activity relationships; nuclear magnetic resonance; polychlorodibenzo-p-dioxins; polychlorodibenzofurans; aryl hydrocarbon receptor; POLYCHLORINATED DIBENZOFURANS PCDFS; HYDROXYLASE INDUCTION POTENCIES; C-13; NMR; SPECTROMETRIC DATA; ESTROGEN-RECEPTOR; AHH INDUCTION; P-DIOXINS; MODELS; QSAR; IDENTIFICATION;
D O I
10.1002/etc.5620220306
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Four spectroscopic data-activity relationship (SDAR) models for polychlorinated dibenzofurans (PCDFs) and dibenzodioxins (PCDDs) binding to the aryl hydrocarbon receptor (AhR) have been developed based on simulated C-13 nuclear magnetic resonance (NMR) data. Models were developed using discriminant function analysis of the compounds' spectral data. An SDAR model with two classifications for 26 PCDF compounds had a leave-one-out (LOO) cross-validation accuracy of 89%. A two-classification SDAR model for 14 PCDD compounds had LOO cross-validation accuracy of 95%. A two-classification SDAR model combining 14 PCDD and 26 PCDF compounds had LOO cross-validation accuracy of 88%, while a four-classification SDAR model based on the same 14 PCDD and 26 PCDF compounds had LOO cross-validation accuracy of 92%. We used each appropriate SDAR model to classify 41 PCDD and/or 121 PCDF compounds with unknown binding affinities to the AhR. The SDAR models provide a rapid, simple, and valid way to model the PCDF and PCDD binding activity in relation to the AhR.
引用
收藏
页码:501 / 509
页数:9
相关论文
共 40 条
[1]   OCCURRENCE AND ABSENCE OF POLYCHLORODIBENZOFURANS AND POLYCHLORODIBENZODIOXINS IN FLY-ASH FROM MUNICIPAL INCINERATORS [J].
BALLSCHMITER, K ;
ZOLLER, W ;
SCHOLZ, C ;
NOTTRODT, A .
CHEMOSPHERE, 1983, 12 (4-5) :585-594
[2]   POLYCHLORINATED DIBENZOFURANS (PCDFS) - EFFECTS OF STRUCTURE ON BINDING TO THE 2,3,7,8-TCDD CYTOSOLIC RECEPTOR PROTEIN, AHH INDUCTION AND TOXICITY [J].
BANDIERA, S ;
SAWYER, T ;
ROMKES, M ;
ZMUDZKA, B ;
SAFE, L ;
MASON, G ;
KEYS, B ;
SAFE, S .
TOXICOLOGY, 1984, 32 (02) :131-144
[3]   BINDING OF POLYCHLORINATED-BIPHENYLS CLASSIFIED AS EITHER PHENOBARBITONE-TYPE, 3-METHYLCHOLANTHRENE-TYPE OR MIXED-TYPE INDUCERS TO CYTOSOLIC AH RECEPTOR [J].
BANDIERA, S ;
SAFE, S ;
OKEY, AB .
CHEMICO-BIOLOGICAL INTERACTIONS, 1982, 39 (03) :259-277
[4]   Use of 13C NMR spectrometric data to produce a predictive model of estrogen receptor binding activity [J].
Beger, RD ;
Freeman, JP ;
Lay, JO ;
Wilkes, JG ;
Miller, DW .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2001, 41 (01) :219-224
[5]   13C NMR quantitative spectrometric data-activity relationship (QSDAR) models of steroids binding the aromatase enzyme [J].
Beger, RD ;
Buzatu, DA ;
Wilkes, JG ;
Lay, JO .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2001, 41 (05) :1360-1366
[6]   Models of polychlorinated dibenzodioxins, dibenzofurans, and biphenyls binding affinity to the aryl hydrocarbon receptor developed using 13C NMR data [J].
Beger, RD ;
Wilkes, JG .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2001, 41 (05) :1322-1329
[7]   13C NMR and electron ionization mass spectrometric data-activity relationship model of estrogen receptor binding [J].
Beger, RD ;
Freeman, JP ;
Lay, JO ;
Wilkes, JG ;
Miller, DW .
TOXICOLOGY AND APPLIED PHARMACOLOGY, 2000, 169 (01) :17-25
[8]   Producing 13C NMR, infrared absorption, and electron ionization mass spectrometric data models of the monodechlorination of chlorobenzenes, chlorophenols, and chloroanilines [J].
Beger, RD ;
Freeman, JP ;
Lay, JO ;
Wilkes, JG ;
Miller, DW .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2000, 40 (06) :1449-1455
[9]  
*BIOR LAB, 2002, HAV NMR SOFTW
[10]  
BREMSER W, 1978, ANAL CHIM ACTA-COMP, V2, P355