Microbial diversity and biogeochemistry of the Guaymas Basin deep-sea hydrothermal plume
被引:100
作者:
Dick, Gregory J.
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机构:
Univ Calif San Diego, Div Marine Biol Res, La Jolla, CA 92093 USA
Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol & Biomed, La Jolla, CA 92093 USAUniv Calif San Diego, Div Marine Biol Res, La Jolla, CA 92093 USA
Dick, Gregory J.
[1
,2
]
Tebo, Bradley M.
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机构:
Univ Calif San Diego, Div Marine Biol Res, La Jolla, CA 92093 USA
Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol & Biomed, La Jolla, CA 92093 USAUniv Calif San Diego, Div Marine Biol Res, La Jolla, CA 92093 USA
Tebo, Bradley M.
[1
,2
]
机构:
[1] Univ Calif San Diego, Div Marine Biol Res, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol & Biomed, La Jolla, CA 92093 USA
P>Hydrothermal plumes are hot spots of microbial biogeochemistry in the deep ocean, yet little is known about the diversity or ecology of microorganisms inhabiting plumes. Recent biogeochemical evidence shows that Mn(II) oxidation in the Guaymas Basin (GB) hydrothermal plume is microbially mediated and suggests that the plume microbial community is distinct from deep-sea communities. Here we use a molecular approach to compare microbial diversity in the GB plume and in background deep seawater communities, and cultivation to identify Mn(II)-oxidizing bacteria from plumes and sediments. Despite dramatic differences in Mn(II) oxidation rates between plumes and background seawater, microbial diversity and membership were remarkably similar. All bacterial clone libraries were dominated by Gammaproteobacteria and archaeal clone libraries were dominated by Crenarchaeota. Two lineages, both phylogenetically related to methanotrophs and/or methylotrophs, were consistently over-represented in the plume. Eight Mn(II)-oxidizing bacteria were isolated, but none of these or previously identified Mn(II) oxidizers were abundant in clone libraries. Taken together with Mn(II) oxidation rates measured in laboratory cultures and in the field, these results suggest that Mn(II) oxidation in the GB hydrothermal plume is mediated by genome-level dynamics (gene content and/or expression) of microorganisms that are indigenous and abundant in the deep sea but have yet to be unidentified as Mn(II) oxidizers.
机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Bhaya, Devaki
;
Grossman, Arthur R.
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机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Grossman, Arthur R.
;
Steunou, Anne-Soisig
论文数: 0引用数: 0
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机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Steunou, Anne-Soisig
;
Khuri, Natalia
论文数: 0引用数: 0
h-index: 0
机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
San Jose State Univ, Dept Comp Sci, San Jose, CA 95192 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Khuri, Natalia
;
Cohan, Frederick M.
论文数: 0引用数: 0
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机构:
Wesleyan Univ Middletown, Dept Biol, Middletown, CT USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Cohan, Frederick M.
;
Hamamura, Natsuko
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Hamamura, Natsuko
;
Melendrez, Melanie C.
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Melendrez, Melanie C.
;
Bateson, Mary M.
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Bateson, Mary M.
;
Ward, David M.
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Ward, David M.
;
Heidelberg, John F.
论文数: 0引用数: 0
h-index: 0
机构:
Univ So Calif, Philip K Wrigley Marine Sci Ctr, Dept Biol Sci, Avalon, CA USA
Inst Genom Res, Rockville, MD USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Bhaya, Devaki
;
Grossman, Arthur R.
论文数: 0引用数: 0
h-index: 0
机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Grossman, Arthur R.
;
Steunou, Anne-Soisig
论文数: 0引用数: 0
h-index: 0
机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Steunou, Anne-Soisig
;
Khuri, Natalia
论文数: 0引用数: 0
h-index: 0
机构:
Carnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
San Jose State Univ, Dept Comp Sci, San Jose, CA 95192 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Khuri, Natalia
;
Cohan, Frederick M.
论文数: 0引用数: 0
h-index: 0
机构:
Wesleyan Univ Middletown, Dept Biol, Middletown, CT USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Cohan, Frederick M.
;
Hamamura, Natsuko
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Hamamura, Natsuko
;
Melendrez, Melanie C.
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Melendrez, Melanie C.
;
Bateson, Mary M.
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Bateson, Mary M.
;
Ward, David M.
论文数: 0引用数: 0
h-index: 0
机构:
Montana State Univ, Dept Land Resources & Environm Studies, Bozeman, MT 59717 USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA
Ward, David M.
;
Heidelberg, John F.
论文数: 0引用数: 0
h-index: 0
机构:
Univ So Calif, Philip K Wrigley Marine Sci Ctr, Dept Biol Sci, Avalon, CA USA
Inst Genom Res, Rockville, MD USACarnegie Inst, Dept Plant Biol, Stanford, CA 94305 USA