Quantitative motion analysis and visualization of cellular structures

被引:40
作者
Gerlich, D [1 ]
Mattes, J [1 ]
Eils, R [1 ]
机构
[1] Deutsch Krebsforschungszentrum, D-69120 Heidelberg, Germany
关键词
four-dimensional imaging; live cell microscopy; graphical visualization; motion analysis; single-particle tracking; segmentation; registration; optical flow; active contour; confinement tree;
D O I
10.1016/S1046-2023(02)00287-6
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The availability of cellular markers tagged with the green fluorescent protein (GFP) has recently allowed a large number of cell biological studies to be carried out in live cells, thereby addressing the dynamic organization of cellular structures. Typically, microscopes capable of video recording are used to generate time-resolved data sets. Dynamic imaging data are complex and often difficult to interpret by pure visual inspection. Therefore, specialized image processing methods for object detection, motion estimation, visualization, and quantitation are required. In this review, we discuss concepts for automated analysis of multidimensional image data from live cell microscopy and their application to the dynamics of cell nuclear subcompartments. (C) 2002 Elsevier Science (USA). All rights reserved.
引用
收藏
页码:3 / 13
页数:11
相关论文
共 56 条
[11]  
Chen Hans, 1995, P197
[12]   Chromatin motion is constrained by association with nuclear compartments in human cells [J].
Chubb, JR ;
Boyle, S ;
Perry, P ;
Bickmore, WA .
CURRENT BIOLOGY, 2002, 12 (06) :439-445
[13]   2 ALGORITHMS FOR THE 3-DIMENSIONAL RECONSTRUCTION OF TOMOGRAMS [J].
CLINE, HE ;
LORENSEN, WE ;
LUDKE, S ;
CRAWFORD, CR ;
TEETER, BC .
MEDICAL PHYSICS, 1988, 15 (03) :320-327
[14]   Quantitative imaging of pre-mRNA splicing factors in living cells [J].
Eils, R ;
Gerlich, D ;
Tvaruskó, W ;
Spector, DL ;
Misteli, T .
MOLECULAR BIOLOGY OF THE CELL, 2000, 11 (02) :413-418
[15]   Real-time simulation and visualization of volumetric brain deformation for image guided neurosurgery [J].
Ferrant, M ;
Nabavi, A ;
Macq, B ;
Kikinis, R ;
Warfield, SK .
MEDICAL IMAGING 2001: VISUALIZATION, DISPLAY, AND IMAGE-GUIDED PROCEDURES, 2001, 4319 :366-373
[16]  
FIERES J, 2001, DAGM, V2191, P76
[17]   Examination of three-dimensional movements in human embryos using computer imaging technology [J].
Gasser, RF ;
Shigihara, S ;
Camero, LF .
COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 1996, 20 (06) :449-457
[18]  
GEBHARD M, 2001, MICCAI, V2208, P1373
[19]  
Gebhard M, 2002, INT C DIAGN IM AN SH, P125
[20]   Four-dimensional imaging and quantitative reconstruction to analyse complex spatiotemporal processes in live cells [J].
Gerlich, D ;
Beaudouin, J ;
Gebhard, M ;
Ellenberg, J ;
Eils, R .
NATURE CELL BIOLOGY, 2001, 3 (09) :852-855