Quantitative motion analysis and visualization of cellular structures

被引:40
作者
Gerlich, D [1 ]
Mattes, J [1 ]
Eils, R [1 ]
机构
[1] Deutsch Krebsforschungszentrum, D-69120 Heidelberg, Germany
关键词
four-dimensional imaging; live cell microscopy; graphical visualization; motion analysis; single-particle tracking; segmentation; registration; optical flow; active contour; confinement tree;
D O I
10.1016/S1046-2023(02)00287-6
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The availability of cellular markers tagged with the green fluorescent protein (GFP) has recently allowed a large number of cell biological studies to be carried out in live cells, thereby addressing the dynamic organization of cellular structures. Typically, microscopes capable of video recording are used to generate time-resolved data sets. Dynamic imaging data are complex and often difficult to interpret by pure visual inspection. Therefore, specialized image processing methods for object detection, motion estimation, visualization, and quantitation are required. In this review, we discuss concepts for automated analysis of multidimensional image data from live cell microscopy and their application to the dynamics of cell nuclear subcompartments. (C) 2002 Elsevier Science (USA). All rights reserved.
引用
收藏
页码:3 / 13
页数:11
相关论文
共 56 条
[31]  
Lavallee S, 1996, COMPUTER INTEGRATED, P77
[32]  
LEITNER F, 1990, CURVES SURFACES, P279
[33]   Interphase chromosomes undergo constrained diffusional motion in living cells [J].
Marshall, WF ;
Straight, A ;
Marko, JF ;
Swedlow, J ;
Dernburg, A ;
Belmont, A ;
Murray, AW ;
Agard, DA ;
Sedat, JW .
CURRENT BIOLOGY, 1997, 7 (12) :930-939
[34]   Structural outlier detection for automatic landmark extraction [J].
Mattes, J ;
Demongeot, J .
MEDICAL IMAGING: 2001: IMAGE PROCESSING, PTS 1-3, 2001, 4322 :602-610
[35]   A shape adapted motion model based on thin-plate splines and point clustering for point set registration [J].
Mattes, J ;
Fieres, J ;
Eils, R .
MEDICAL IMAGING 2002: IMAGE PROCESSING, VOL 1-3, 2002, 4684 :518-527
[36]  
Mattes J, 2000, LECT NOTES COMPUT SC, V1953, P392
[37]   The dynamics of a pre-mRNA splicing factor in living cells [J].
Misteli, T ;
Caceres, JF ;
Spector, DL .
NATURE, 1997, 387 (6632) :523-527
[38]   Computation and analysis of image motion: A synopsis of current problems and methods [J].
Mitiche, A ;
Bouthemy, P .
INTERNATIONAL JOURNAL OF COMPUTER VISION, 1996, 19 (01) :29-55
[39]   Metabolic-energy-dependent movement of PML bodies within the mammalian cell nucleus [J].
Muratani, M ;
Gerlich, D ;
Janicki, SM ;
Gebhard, M ;
Eils, R ;
Spector, DL .
NATURE CELL BIOLOGY, 2002, 4 (02) :106-110
[40]   LINEAR FEATURE-EXTRACTION AND DESCRIPTION [J].
NEVATIA, R ;
BABU, KR .
COMPUTER GRAPHICS AND IMAGE PROCESSING, 1980, 13 (03) :257-269