KINETIC IDENTIFICATION OF A HYDROGEN-BONDING PAIR IN THE GLUCOAMYLASE-MALTOSE TRANSITION-STATE COMPLEX

被引:44
作者
SIERKS, MR [1 ]
SVENSSON, B [1 ]
机构
[1] CARLSBERG LAB,DEPT CHEM,GAMLE CARLSBERG VEJ 10,DK-2500 COPENHAGEN,DENMARK
来源
PROTEIN ENGINEERING | 1992年 / 5卷 / 02期
关键词
ACTIVE SITE MUTANT; HYDROGEN-BOND ENERGY; KINETICS; MOLECULAR RECOGNITION;
D O I
10.1093/protein/5.2.185
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Molecular recognition and site-directed mutagenesis are used in combination to identify kinetically, transition state interactions between glucoamylase (GA) and the substrate maltose. Earlier studies of mutant Glu180 --> Gln GA had indicated a role in substrate binding for Glu180 (Sierks, M.R., Ford, C., Reilly, P.J. and Svensson, B. (1990) Protein Engng, 3, 193 - 198). Here, changes in activation energies calculated from measured k(cat)/K(m) values for a series of deoxygenated maltose analogues indicate hydrogen bonding between the mutant enzyme and the 3-OH group of the reducing end sugar ring. Using the same substrate analogues and determining activation energies with wild-type GA an additional hydrogen bond with the 2-OH group of maltose is attributed to an interaction with the carboxylate Glu180. This novel combination of molecular recognition and site-directed mutagenesis enables an enzyme substrate transition state contact to be identified and characterized even without access to the three dimensional structure of the enzyme. Given the distant structural relationships between glucoamylases and several starch hydrolases (Svensson, B. (1988) FEBS Lett., 230, 72-76), such identified contacts may ultimately guide tailoring of the activity of these related enzymes.
引用
收藏
页码:185 / 188
页数:4
相关论文
共 24 条
[1]  
[Anonymous], 1985, ENZYME STRUCTURE MEC
[2]   THE SUBSTRATE-SPECIFICITY OF THE ENZYME AMYLOGLUCOSIDASE (AMG) .1. DEOXY DERIVATIVES [J].
BOCK, K ;
PEDERSEN, H .
ACTA CHEMICA SCANDINAVICA SERIES B-ORGANIC CHEMISTRY AND BIOCHEMISTRY, 1987, 41 (08) :617-628
[3]   IDENTIFICATION OF AN ESSENTIAL TRYPTOPHANYL RESIDUE IN THE PRIMARY STRUCTURE OF GLUCOAMYLASE-G2 FROM ASPERGILLUS-NIGER [J].
CLARKE, AJ ;
SVENSSON, B .
CARLSBERG RESEARCH COMMUNICATIONS, 1984, 49 (06) :559-566
[4]   THE ROLE OF TRYPTOPHANYL RESIDUES IN THE FUNCTION OF ASPERGILLUS-NIGER GLUCOAMYLASE-G1 AND GLUCOAMYLASE-G2 [J].
CLARKE, AJ ;
SVENSSON, B .
CARLSBERG RESEARCH COMMUNICATIONS, 1984, 49 (01) :111-122
[5]   HYDROGEN-BONDING AND BIOLOGICAL SPECIFICITY ANALYZED BY PROTEIN ENGINEERING [J].
FERSHT, AR ;
SHI, JP ;
KNILLJONES, J ;
LOWE, DM ;
WILKINSON, AJ ;
BLOW, DM ;
BRICK, P ;
CARTER, P ;
WAYE, MMY ;
WINTER, G .
NATURE, 1985, 314 (6008) :235-238
[6]   MOLECULAR RECOGNITION .3. THE BINDING OF THE H-TYPE-2 HUMAN-BLOOD GROUP DETERMINANT BY THE LECTIN-I OF ULEX-EUROPAEUS [J].
HINDSGAUL, O ;
KHARE, DP ;
BACH, M ;
LEMIEUX, RU .
CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 1985, 63 (10) :2653-2658
[8]   KINETIC STUDIES ON GLUC-AMYLASE .3. INFLUENCE OF PH ON RATES OF HYDROLYSIS OF MALTOSE AND PANOSE [J].
HIROMI, K ;
TAKAHASHI, K ;
HAMAUZU, ZI ;
ONO, S .
JOURNAL OF BIOCHEMISTRY, 1966, 59 (05) :469-+
[9]   KINETIC STUDIES ON GLUC-AMYLASE .2. COMPETITION BETWEEN 2 TYPES OF SUBSTRATE HAVING ALPHA-1,4 AND ALPHA-1,6 GLUCOSIDIC LINKAGE [J].
HIROMI, K ;
HAMAUZU, ZI ;
TAKAHASHI, K ;
ONO, S .
JOURNAL OF BIOCHEMISTRY, 1966, 59 (04) :411-+
[10]   SUBSITE STRUCTURE AND LIGAND-BINDING MECHANISM OF GLUCOAMYLASE [J].
HIROMI, K ;
OHNISHI, M ;
TANAKA, A .
MOLECULAR AND CELLULAR BIOCHEMISTRY, 1983, 51 (01) :79-95