Simultaneous Truth and Performance Level Estimation Through Fusion of Probabilistic Segmentations

被引:57
作者
Akhondi-Asl, Alireza [1 ]
Warfield, Simon K. [1 ]
机构
[1] Childrens Hosp, Dept Radiol, Computat Radiol Lab, Boston, MA 02115 USA
基金
美国国家卫生研究院;
关键词
Label fusion; performance evaluation; probabilistic segmentation; reference standard; simultaneous truth and performance level estimation (STAPLE); MULTI-ATLAS SEGMENTATION; SPATIALLY VARYING PERFORMANCE; LABEL FUSION; IMAGE SEGMENTATION; HUMAN-BRAIN; STATISTICAL FUSION; STAPLE; VARIABILITY; VALIDATION; STRATEGIES;
D O I
10.1109/TMI.2013.2266258
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Recent research has demonstrated that improved image segmentation can be achieved by multiple template fusion utilizing both label and intensity information. However, intensity weighted fusion approaches use local intensity similarity as a surrogate measure of local template quality for predicting target segmentation and do not seek to characterize template performance. This limits both the usefulness and accuracy of these techniques. Our work here was motivated by the observation that the local intensity similarity is a poor surrogate measure for direct comparison of the template image with the true image target segmentation. Although the true image target segmentation is not available, a high quality estimate can be inferred, and this in turn allows a principled estimate to be made of the local quality of each template at contributing to the target segmentation. We developed a fusion algorithm that uses probabilistic segmentations of the target image to simultaneously infer a reference standard segmentation of the target image and the local quality of each probabilistic segmentation. The concept of comparing templates to a hidden reference standard segmentation enables accurate assessments of the contribution of each template to inferring the target image segmentation to be made, and in practice leads to excellent target image segmentation. We have used the new algorithm for the multiple-template-based segmentation and parcellation of magnetic resonance images of the brain. Intensity and label map images of each one of the aligned templates are used to train a local Gaussian mixture model based classifier. Then, each classifier is used to compute the probabilistic segmentations of the target image. Finally, the generated probabilistic segmentations are fused together using the new fusion algorithm to obtain the segmentation of the target image. We evaluated our method in comparison to other state-of-the-art segmentation methods. We demonstrated that our new fusion algorithm has higher segmentation performance than these methods.
引用
收藏
页码:1840 / 1852
页数:13
相关论文
共 39 条
[1]   Hippocampal volumetry for lateralization of temporal lobe epilepsy: Automated versus manual methods [J].
Akhondi-Asl, Alireza ;
Jafari-Khouzani, Kourosh ;
Elisevich, Kost ;
Soltanian-Zadeh, Hamid .
NEUROIMAGE, 2011, 54 :S218-S226
[2]   Multi-atlas based segmentation of brain images: Atlas selection and its effect on accuracy [J].
Aljabar, P. ;
Heckemann, R. A. ;
Hammers, A. ;
Hajnal, J. V. ;
Rueckert, D. .
NEUROIMAGE, 2009, 46 (03) :726-738
[3]   Combination Strategies in Multi-Atlas Image Segmentation: Application to Brain MR Data [J].
Artaechevarria, Xabier ;
Munoz-Barrutia, Arrate ;
Ortiz-de-Solorzano, Carlos .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2009, 28 (08) :1266-1277
[4]   Non-local statistical label fusion for multi-atlas segmentation [J].
Asman, Andrew J. ;
Landman, Bennett A. .
MEDICAL IMAGE ANALYSIS, 2013, 17 (02) :194-208
[5]   Formulating Spatially Varying Performance in the Statistical Fusion Framework [J].
Asman, Andrew J. ;
Landman, Bennett A. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2012, 31 (06) :1326-1336
[6]   Robust Statistical Label Fusion Through Consensus Level, Labeler Accuracy, and Truth Estimation (COLLATE) [J].
Asman, Andrew J. ;
Landman, Bennett A. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2011, 30 (10) :1779-1794
[7]   The optimal template effect in hippocampus studies of diseased populations [J].
Avants, Brian B. ;
Yushkevich, Paul ;
Pluta, John ;
Minkoff, David ;
Korczykowski, Marc ;
Detre, John ;
Gee, James C. .
NEUROIMAGE, 2010, 49 (03) :2457-2466
[8]   Atlas stratification [J].
Blezek, Daniel J. ;
Miller, James V. .
MEDICAL IMAGE ANALYSIS, 2007, 11 (05) :443-457
[9]  
Brouwer LEJ, 1912, MATH ANN, V71, P97
[10]   STEPS: Similarity and Truth Estimation for Propagated Segmentations and its application to hippocampal segmentation and brain parcelation [J].
Cardoso, M. Jorge ;
Leung, Kelvin ;
Modat, Marc ;
Keihaninejad, Shiva ;
Cash, David ;
Barnes, Josephine ;
Fox, Nick C. ;
Ourselin, Sebastien .
MEDICAL IMAGE ANALYSIS, 2013, 17 (06) :671-684