Standardizing Analysis of Circulating MicroRNA: Clinical and Biological Relevance

被引:83
作者
Farina, Nicholas H. [1 ,2 ]
Wood, Marie E. [1 ,3 ]
Perrapato, Scott D. [1 ,4 ]
Francklyn, Christopher S. [1 ,2 ]
Stein, Gary S. [1 ,2 ]
Stein, Janet L. [1 ,2 ]
Lian, Jane B. [1 ,2 ]
机构
[1] Univ Vermont, Coll Med, Vermont Canc Ctr Basic & Translat Res, Burlington, VT 05405 USA
[2] Univ Vermont, Coll Med, Dept Biochem, Burlington, VT 05405 USA
[3] Univ Vermont, Coll Med, Div Hematol Oncol, Dept Med, Burlington, VT 05405 USA
[4] Univ Vermont, Coll Med, Div Urol, Dept Surg, Burlington, VT 05405 USA
关键词
CIRCULATING microRNA; c-miRNA; miRNA; SERUM; PLASMA; qPCR; RNA ISOLATION; BIOMARKER; CLINICAL SAMPLE; CANCER; SERUM; RNA;
D O I
10.1002/jcb.24745
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Circulating microRNAs (c-miRNAs) provide a new dimension as clinical biomarkers for disease diagnosis, progression, and response to treatment. However, the discovery of individual miRNAs from biofluids that reliably reflect disease states is in its infancy. The highly variable nature of published studies exemplifies a need to standardize the analysis of miRNA in circulation. Here, we show that differential sample handling of serum leads to inconsistent and incomparable results. We present a standardized method of RNA isolation from serum that eliminates multiple freeze/thaw cycles, provides at least three normalization mechanisms, and can be utilized in studies that compare both archived and prospectively collected samples. It is anticipated that serum processed as described here can be profiled, either globally or on a gene by gene basis, for c-miRNAs and other non-coding RNA in the circulation to reveal novel, clinically relevant epigenetic signatures for a wide range of diseases. J. Cell. Biochem. 115: 805-811, 2014. (c) 2013 Wiley Periodicals, Inc.
引用
收藏
页码:805 / 811
页数:7
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