Cryo-electron microscopy of spliceosomal components

被引:71
作者
Stark, Holger [1 ]
Luehrmann, Reinhard [1 ]
机构
[1] Max Planck Inst Biophys Chem, D-37077 Gottingen, Germany
来源
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE | 2006年 / 35卷
关键词
snRNP; RNA; single-particle analysis; image processing; splicing machinery; pre-mRNA splicing;
D O I
10.1146/annurev.biophys.35.040405.101953
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Splicing is an essential step of gene expression in which introns are removed from pre-mRNA to generate mature mRNA that can be translated by the ribosome. This reaction is catalyzed by a large and dynamic macromolecular RNP complex called the spliceosome. The spliceosome is formed by the stepwise integration of five snRNPs composed of U1, U2, U4, U5, and U6 snRNAs and more than 150 proteins binding sequentially to pre-mRNA. To study the structure of this particularly dynamic RNP machine that undergoes many changes in composition and conformation, single-particle cryo electron microscopy (cryo-EM) is currently the method of choice. In this review, we present the results of these cryo-EM studies along with some new perspectives on structural and functional aspects of splicing, and we outline the perspectives and limitations of the cryoEM technique in obtaining structural information about macromolecular complexes, such as the spliceosome, involved in splicing.
引用
收藏
页码:435 / 457
页数:23
相关论文
共 99 条
[51]   3-DIMENSIONAL RECONSTRUCTION OF SINGLE PARTICLES EMBEDDED IN ICE [J].
PENCZEK, P ;
RADERMACHER, M ;
FRANK, J .
ULTRAMICROSCOPY, 1992, 40 (01) :33-53
[52]   Gridding-based direct Fourier inversion of the three-dimensional ray transform [J].
Penczek, PA ;
Renka, R ;
Schomberg, H .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 2004, 21 (04) :499-509
[53]   THE RIBOSOME AT IMPROVED RESOLUTION - NEW TECHNIQUES FOR MERGING AND ORIENTATION REFINEMENT IN 3D CRYOELECTRON MICROSCOPY OF BIOLOGICAL PARTICLES [J].
PENCZEK, PA ;
GRASSUCCI, RA ;
FRANK, J .
ULTRAMICROSCOPY, 1994, 53 (03) :251-270
[54]   TYSON: Robust searching, sorting, and selecting of single particles in electron micrographs [J].
Plaisier, JR ;
Koning, RI ;
Koerten, HK ;
van Heel, M ;
Abrahams, JP .
JOURNAL OF STRUCTURAL BIOLOGY, 2004, 145 (1-2) :76-83
[55]   Crystal structure of the spliceosomal U2B"-U2A′ protein complex bound to a fragment of U2 small nuclear RNA [J].
Price, SR ;
Evens, PR ;
Nagai, K .
NATURE, 1998, 394 (6694) :645-650
[56]   Three recognition events at the branch-site adenine [J].
Query, CC ;
Strobel, SA ;
Sharp, PA .
EMBO JOURNAL, 1996, 15 (06) :1392-1402
[57]   3-DIMENSIONAL RECONSTRUCTION OF SINGLE PARTICLES FROM RANDOM AND NONRANDOM TILT SERIES [J].
RADERMACHER, M .
JOURNAL OF ELECTRON MICROSCOPY TECHNIQUE, 1988, 9 (04) :359-394
[58]   Large nuclear RNP particles - the nuclear pre-mRNA processing machine [J].
Raitskin, O ;
Angenitzki, M ;
Sperling, J ;
Sperling, R .
JOURNAL OF STRUCTURAL BIOLOGY, 2002, 140 (1-3) :123-130
[59]   Large-scale proteomic analysis of the human splicesome [J].
Rappsilber, J ;
Ryder, U ;
Lamond, AI ;
Mann, M .
GENOME RESEARCH, 2002, 12 (08) :1231-1245
[60]   Crystal structure of the human U4/U6 small nuclear ribonucleoprotein particle-specific SnuCyp-20, a nuclear cyclophilin [J].
Reidt, U ;
Reuter, K ;
Achsel, T ;
Ingelfinger, D ;
Lührmann, R ;
Ficner, R .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (11) :7439-7442