Helices and other secondary structures of β- and γ-peptides

被引:294
作者
Seebach, D
Hook, DF
Glättli, A
机构
[1] ETH, Organ Chem Lab, CH-8093 Zurich, Switzerland
[2] ETH, Phys Chem Lab, CH-8093 Zurich, Switzerland
关键词
beta-amino acid; conformational analysis; GROMOS simulation package; hairpin turn; helix; molecular dynamics simulation; NMR; beta-peptide; gamma-peptide; secondary structure; torsion angle;
D O I
10.1002/bip.20391
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The principal secondary structural motifs adopted by peptides assembled from beta-amino acid units are discussed: the 14-, 12, 10, 12/10-, and 8-helices, as well as the hairpin turn, extended structures, stacks, and sheets. Features that promote a particular folding propensity are outlined and illustrated by structures determined in solution (NMR) and in the solid-state (x-ray). The N-CbetaCalpha-CO dihedral angles from molecular dynamics simulations, which are indicative of a particular secondary structure, are presented. A brief description of a helix and a turn of gamma-peptides is also given. (C) 2005 Wiley Periodicals, Inc.
引用
收藏
页码:23 / 37
页数:15
相关论文
共 159 条
[41]   The fourth helical secondary structure of β-peptides:: The (P)-28-helix of a β-hexapeptide consisting of (2R,3S)-3-amino-2-hydroxy acid residues [J].
Gademann, K ;
Häne, A ;
Rueping, M ;
Jaun, B ;
Seebach, D .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2003, 42 (13) :1534-1537
[42]  
Gademann K, 2001, HELV CHIM ACTA, V84, P2924, DOI 10.1002/1522-2675(20011017)84:10<2924::AID-HLCA2924>3.0.CO
[43]  
2-E
[44]  
Gademann K, 1999, HELV CHIM ACTA, V82, P1, DOI 10.1002/(SICI)1522-2675(19990113)82:1<1::AID-HLCA1>3.0.CO
[45]  
2-N
[46]  
Gademann K, 1999, ANGEW CHEM INT EDIT, V38, P1223, DOI 10.1002/(SICI)1521-3773(19990503)38:9<1223::AID-ANIE1223>3.0.CO
[47]  
2-A
[48]  
Gademann K, 1999, HELV CHIM ACTA, V82, P957, DOI 10.1002/(SICI)1522-2675(19990609)82:6<957::AID-HLCA957>3.0.CO
[49]  
2-H
[50]  
GADEMANN K, 2003, ANGEW CHEM, V115, P1573