Metabolite Profiling Identifies a Key Role for Glycine in Rapid Cancer Cell Proliferation

被引:1116
作者
Jain, Mohit [1 ,2 ,3 ,4 ,5 ]
Nilsson, Roland [1 ,2 ,3 ,4 ,6 ]
Sharma, Sonia [7 ]
Madhusudhan, Nikhil [1 ,2 ,3 ,4 ]
Kitami, Toshimori [1 ,2 ,3 ,4 ]
Souza, Amanda L. [1 ]
Kafri, Ran [2 ]
Kirschner, Marc W. [2 ]
Clish, Clary B. [1 ]
Mootha, Vamsi K. [1 ,2 ,3 ,4 ]
机构
[1] Broad Inst, Cambridge, MA 02142 USA
[2] Harvard Univ, Sch Med, Dept Syst Biol, Boston, MA 02115 USA
[3] Massachusetts Gen Hosp, Dept Mol Biol, Boston, MA 02114 USA
[4] Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
[5] Brigham & Womens Hosp, Dept Med, Div Cardiovasc Med, Boston, MA 02115 USA
[6] Karolinska Inst, Dept Med, Unit Computat Med, S-17176 Stockholm, Sweden
[7] La Jolla Inst Allergy & Immunol, La Jolla, CA 92037 USA
关键词
SERINE HYDROXYMETHYLTRANSFERASE; EXPRESSION SIGNATURE; DEPENDENCE; PATHWAY; SCREEN;
D O I
10.1126/science.1218595
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Metabolic reprogramming has been proposed to be a hallmark of cancer, yet a systematic characterization of the metabolic pathways active in transformed cells is currently lacking. Using mass spectrometry, we measured the consumption and release ( CORE) profiles of 219 metabolites from media across the NCI-60 cancer cell lines, and integrated these data with a preexisting atlas of gene expression. This analysis identified glycine consumption and expression of the mitochondrial glycine biosynthetic pathway as strongly correlated with rates of proliferation across cancer cells. Antagonizing glycine uptake and its mitochondrial biosynthesis preferentially impaired rapidly proliferating cells. Moreover, higher expression of this pathway was associated with greater mortality in breast cancer patients. Increased reliance on glycine may represent a metabolic vulnerability for selectively targeting rapid cancer cell proliferation.
引用
收藏
页码:1040 / 1044
页数:5
相关论文
共 29 条
[21]   Functional genomics reveal that the serine synthesis pathway is essential in breast cancer [J].
Possemato, Richard ;
Marks, Kevin M. ;
Shaul, Yoav D. ;
Pacold, Michael E. ;
Kim, Dohoon ;
Birsoy, Kivanc ;
Sethumadhavan, Shalini ;
Woo, Hin-Koon ;
Jang, Hyun G. ;
Jha, Abhishek K. ;
Chen, Walter W. ;
Barrett, Francesca G. ;
Stransky, Nicolas ;
Tsun, Zhi-Yang ;
Cowley, Glenn S. ;
Barretina, Jordi ;
Kalaany, Nada Y. ;
Hsu, Peggy P. ;
Ottina, Kathleen ;
Chan, Albert M. ;
Yuan, Bingbing ;
Garraway, Levi A. ;
Root, David E. ;
Mino-Kenudson, Mari ;
Brachtel, Elena F. ;
Driggers, Edward M. ;
Sabatini, David M. .
NATURE, 2011, 476 (7360) :346-U119
[22]   A plasma signature of human mitochondrial disease revealed through metabolic profiling of spent media from cultured muscle cells [J].
Shaham, Oded ;
Slate, Nancy G. ;
Goldberger, Olga ;
Xu, Qiuwei ;
Ramanathan, Arvind ;
Souza, Amanda L. ;
Clish, Clary B. ;
Sims, Katherine B. ;
Mootha, Vamsi K. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (04) :1571-1575
[23]   The NCI60 human tumour cell line anticancer drug screen [J].
Shoemaker, Robert H. .
NATURE REVIEWS CANCER, 2006, 6 (10) :813-823
[24]   Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression [J].
Sreekumar, Arun ;
Poisson, Laila M. ;
Rajendiran, Thekkelnaycke M. ;
Khan, Amjad P. ;
Cao, Qi ;
Yu, Jindan ;
Laxman, Bharathi ;
Mehra, Rohit ;
Lonigro, Robert J. ;
Li, Yong ;
Nyati, Mukesh K. ;
Ahsan, Aarif ;
Kalyana-Sundaram, Shanker ;
Han, Bo ;
Cao, Xuhong ;
Byun, Jaeman ;
Omenn, Gilbert S. ;
Ghosh, Debashis ;
Pennathur, Subramaniam ;
Alexander, Danny C. ;
Berger, Alvin ;
Shuster, Jeffrey R. ;
Wei, John T. ;
Varambally, Sooryanarayana ;
Beecher, Christopher ;
Chinnaiyan, Arul M. .
NATURE, 2009, 457 (7231) :910-914
[25]   The cancer genome [J].
Stratton, Michael R. ;
Campbell, Peter J. ;
Futreal, P. Andrew .
NATURE, 2009, 458 (7239) :719-724
[26]   Compartmentalization of Mammalian Folate-Mediated One-Carbon Metabolism [J].
Tibbetts, Anne S. ;
Appling, Dean R. .
ANNUAL REVIEW OF NUTRITION, VOL 30, 2010, 30 :57-81
[27]   A gene-expression signature as a predictor of survival in breast cancer. [J].
van de Vijver, MJ ;
He, YD ;
van 't Veer, LJ ;
Dai, H ;
Hart, AAM ;
Voskuil, DW ;
Schreiber, GJ ;
Peterse, JL ;
Roberts, C ;
Marton, MJ ;
Parrish, M ;
Atsma, D ;
Witteveen, A ;
Glas, A ;
Delahaye, L ;
van der Velde, T ;
Bartelink, H ;
Rodenhuis, S ;
Rutgers, ET ;
Friend, SH ;
Bernards, R .
NEW ENGLAND JOURNAL OF MEDICINE, 2002, 347 (25) :1999-2009
[28]   Dependence of Mouse Embryonic Stem Cells on Threonine Catabolism [J].
Wang, Jian ;
Alexander, Peter ;
Wu, Leeju ;
Hammer, Robert ;
Cleaver, Ondine ;
McKnight, Steven L. .
SCIENCE, 2009, 325 (5939) :435-439
[29]   Glycine Decarboxylase Activity Drives Non-Small Cell Lung Cancer Tumor-Initiating Cells and Tumorigenesis [J].
Zhang, Wen Cai ;
Shyh-Chang, Ng ;
Yang, He ;
Rai, Amit ;
Umashankar, Shivshankar ;
Ma, Siming ;
Soh, Boon Seng ;
Sun, Li Li ;
Tai, Bee Choo ;
Nga, Min En ;
Bhakoo, Kishore Kumar ;
Jayapal, Senthil Raja ;
Nichane, Massimo ;
Yu, Qiang ;
Ahmed, Dokeu A. ;
Tan, Christie ;
Sing, Wong Poo ;
Tam, John ;
Thirugananam, Agasthian ;
Noghabi, Monireh Soroush ;
Pang, Yin Huei ;
Ang, Haw Siang ;
Robson, Paul ;
Kaldis, Philipp ;
Soo, Ross Andrew ;
Swarup, Sanjay ;
Lim, Elaine Hsuen ;
Lim, Bing .
CELL, 2012, 148 (1-2) :259-272