Structural Insight into the Zinc Finger CW Domain as a Histone Modification Reader

被引:89
作者
He, Fahu [1 ]
Umehara, Takashi [1 ]
Saito, Kohei [1 ]
Harada, Takushi [1 ]
Watanabe, Satoru [1 ]
Yabuki, Takashi [1 ]
Kigawa, Takanori [1 ,2 ]
Takahashi, Mari [1 ]
Kuwasako, Kanako [1 ]
Tsuda, Kengo [1 ]
Matsuda, Takayoshi [1 ]
Aoki, Masaaki [1 ]
Seki, Eiko [1 ]
Kobayashi, Naohiro [1 ]
Guentert, Peter [3 ,4 ,5 ]
Yokoyama, Shigeyuki [1 ,6 ]
Muto, Yutaka [1 ]
机构
[1] RIKEN Syst & Struct Biol Ctr, Tsurumi Ku, Yokohama, Kanagawa 2300045, Japan
[2] Tokyo Inst Technol, Midori Ku, Yokohama, Kanagawa 2268502, Japan
[3] RIKEN Genom Sci Ctr, Tatsuo Miyazawa Mem Program, Yokohama, Kanagawa 2300045, Japan
[4] Goethe Univ Frankfurt, Frankfurt Inst Adv Studies, D-60438 Frankfurt, Germany
[5] Goethe Univ Frankfurt, Inst Biophys Chem, Ctr Biomol Magnet Resonance, D-60438 Frankfurt, Germany
[6] Univ Tokyo, Grad Sch Sci, Dept Biophys & Biochem, Bunkyo Ku, Tokyo 1130033, Japan
基金
日本学术振兴会;
关键词
PHD FINGER; NMR STRUCTURE; METHYLATION; PROTEIN; RECOGNITION; ARABIDOPSIS; DEMETHYLASE; DYNAMICS; PROGRAMS; H3K4ME3;
D O I
10.1016/j.str.2010.06.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The zinc finger CW (zf-CW) domain is a motif of about 60 residues that is frequently found in proteins involved in epigenetic regulation. Here, we determined the NMR solution structure of the zf-CW domain of the human zf-CW and PWWP domain containing protein 1 (ZCWPW1). The zf-CW domain adopts a new fold in which a zinc ion is coordinated tetrahedrally by four conserved Cys ligand residues. The tertiary structure of the zf-CW domain partially resembles that adopted by the plant homeo domain (PHD) finger bound to the histone tail, suggesting that the zf-CW domain and the PHD finger have similar functions. The solution structure of the complex of the zf-CW domain with the histone H3 tail peptide (1-10) with trimethylated K4 clarified its binding mode. Our structural and biochemical studies have identified the zf-CW domain as a member of the histone modification reader modules for epigenetic regulation.
引用
收藏
页码:1127 / 1139
页数:13
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