Technology Insight: metabonomics in gastroenterology - basic principles and potential clinical applications

被引:32
作者
Bjerrum, Jacob T.
Nielsen, Ole H. [3 ]
Wang, Yulan L. [1 ]
Olsen, Jorgen [2 ]
机构
[1] Chinese Acad Sci, Wuhan Inst Phys & Math, Wuhan Ctr Magnet Resonance, State Key Lab Magnet Resonance & Atom & Mol Phys, Wuhan, Peoples R China
[2] Univ Copenhagen, Panum Inst, Dept Mol & Cellular Med, DK-1168 Copenhagen, Denmark
[3] Univ Copenhagen, Herlev Hosp, Med Sect, Gastroenterol Unit, DK-2730 Herlev, Denmark
来源
NATURE CLINICAL PRACTICE GASTROENTEROLOGY & HEPATOLOGY | 2008年 / 5卷 / 06期
关键词
chemometrics; gastroenterology; metabonomics; nuclear magnetic resonance spectroscopy; systems biology;
D O I
10.1038/ncpgasthep1125
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
Metabonomics-the study of metabolic changes in an integrated biologic system-is an emerging field. This discipline joins the other 'omics'(genomics, transcriptomics and proteomics) to give rise to a comprehensive, systems-biology approach to the evaluation of holistic in vivo function. Metabonomics, especially when based on nuclear magnetic resonance spectroscopy, has the potential to identify biomarkers and prognostic factors, enhance clinical diagnosis, and expand hypothesis generation. As a consequence, the use of metabonomics has been extensively explored in the past decade, and applied successfully to the study of human diseases, toxicology, microbes, nutrition, and plant biology. This Review introduces the basic principles of nuclear magnetic resonance spectroscopy and commonly used tools for multivariate data analysis, before considering the applications and future potential of metabonomics in basic and clinical research, with emphasis on applications in the field of gastroenterology.
引用
收藏
页码:332 / 343
页数:12
相关论文
共 105 条
[71]   INDETERMINATE COLITIS [J].
NICHOLLS, RJ ;
WELLS, AD .
BAILLIERES CLINICAL GASTROENTEROLOGY, 1992, 6 (01) :105-112
[72]   'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data [J].
Nicholson, JK ;
Lindon, JC ;
Holmes, E .
XENOBIOTICA, 1999, 29 (11) :1181-1189
[73]   Metabonomics: a platform for studying drug toxicity and gene function [J].
Nicholson, JK ;
Connelly, J ;
Lindon, JC ;
Holmes, E .
NATURE REVIEWS DRUG DISCOVERY, 2002, 1 (02) :153-161
[74]   Understanding 'global' systems biology: Metabonomics and the continuum of metabolism [J].
Nicholson, JK ;
Wilson, ID .
NATURE REVIEWS DRUG DISCOVERY, 2003, 2 (08) :668-676
[75]  
Nielsen OH, 2000, AM J GASTROENTEROL, V95, P359
[76]   Mitochondrial dysfunction in schizophrenia: evidence for compromised brain metabolism and oxidative stress [J].
Prabakaran, S ;
Swatton, JE ;
Ryan, MM ;
Huffaker, SJ ;
Huang, JTJ ;
Griffin, JL ;
Wayland, M ;
Freeman, T ;
Dudbridge, F ;
Lilley, KS ;
Karp, NA ;
Hester, S ;
Tkachev, D ;
Mimmack, ML ;
Yolken, RH ;
Webster, MJ ;
Torrey, EF ;
Bahn, S .
MOLECULAR PSYCHIATRY, 2004, 9 (07) :684-697
[77]  
Preul MC, 1998, NMR BIOMED, V11, P192, DOI 10.1002/(SICI)1099-1492(199806/08)11:4/5<192::AID-NBM535>3.0.CO
[78]  
2-3
[79]   Accurate, noninvasive diagnosis of human brain tumors by using proton magnetic resonance spectroscopy [J].
Preul, MC ;
Caramanos, Z ;
Collins, DL ;
Villemure, JG ;
Leblanc, R ;
Olivier, A ;
Pokrupa, R ;
Arnold, DL .
NATURE MEDICINE, 1996, 2 (03) :323-325
[80]   A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations [J].
Raamsdonk, LM ;
Teusink, B ;
Broadhurst, D ;
Zhang, NS ;
Hayes, A ;
Walsh, MC ;
Berden, JA ;
Brindle, KM ;
Kell, DB ;
Rowland, JJ ;
Westerhoff, HV ;
van Dam, K ;
Oliver, SG .
NATURE BIOTECHNOLOGY, 2001, 19 (01) :45-50