Potent and selective chemical probe of hypoxic signalling downstream of HIF-α hydroxylation via VHL inhibition

被引:193
作者
Frost, Julianty [1 ]
Galdeano, Carles [1 ,5 ]
Soares, Pedro [1 ]
Gadd, Morgan S. [1 ]
Grzes, Katarzyna M. [2 ]
Ellis, Lucy [1 ]
Epemolu, Ola [1 ]
Shimamura, Satoko [3 ]
Bantscheff, Marcus [3 ]
Grandi, Paola [3 ]
Read, Kevin D. [1 ]
Cantrell, Doreen A. [2 ]
Rocha, Sonia [4 ]
Ciulli, Alessio [1 ]
机构
[1] Univ Dundee, Sch Life Sci, Div Biol Chem & Drug Discovery, Dow St, Dundee DD1 5EH, Scotland
[2] Univ Dundee, Sch Life Sci, Div Cell Signaling & Immunol, Dow St, Dundee DD1 5EH, Scotland
[3] Cellzome GmbH, Meyerhofstr 1, D-69117 Heidelberg, Germany
[4] Univ Dundee, Sch Life Sci, Ctr Gene Regulat & Express, Dow St, Dundee DD1 5EH, Scotland
[5] Univ Barcelona, Fac Farm, Av Joan 23 27-31, E-08028 Barcelona, Spain
基金
欧洲研究理事会; 英国惠康基金; 英国生物技术与生命科学研究理事会;
关键词
SMALL-MOLECULE INHIBITORS; E3 UBIQUITIN LIGASE; TUMOR-SUPPRESSOR; INDUCIBLE FACTORS; DRUG DISCOVERY; PROTEIN; COMPLEX; DEGRADATION; ERYTHROPOIESIS; HYDROXYPROLINE;
D O I
10.1038/ncomms13312
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
070301 [无机化学]; 070403 [天体物理学]; 070507 [自然资源与国土空间规划学]; 090105 [作物生产系统与生态工程];
摘要
Chemical strategies to using small molecules to stimulate hypoxia inducible factors (HIFs) activity and trigger a hypoxic response under normoxic conditions, such as iron chelators and inhibitors of prolyl hydroxylase domain (PHD) enzymes, have broad-spectrum activities and off-target effects. Here we disclose VH298, a potent VHL inhibitor that stabilizes HIF-alpha and elicits a hypoxic response via a different mechanism, that is the blockade of the VHL:HIF-alpha protein-protein interaction downstream of HIF-alpha hydroxylation by PHD enzymes. We show that VH298 engages with high affinity and specificity with VHL as its only major cellular target, leading to selective on-target accumulation of hydroxylated HIF-alpha in a concentration- and time-dependent fashion in different cell lines, with subsequent upregulation of HIF-target genes at both mRNA and protein levels. VH298 represents a high-quality chemical probe of the HIF signalling cascade and an attractive starting point to the development of potential new therapeutics targeting hypoxia signalling.
引用
收藏
页数:12
相关论文
共 79 条
[1]
The promise and peril of chemical probes [J].
Arrowsmith, Cheryl H. ;
Audia, James E. ;
Austin, Christopher ;
Baell, Jonathan ;
Bennett, Jonathan ;
Blagg, Julian ;
Bountra, Chas ;
Brennan, Paul E. ;
Brown, Peter J. ;
Bunnage, Mark E. ;
Buser-Doepner, Carolyn ;
Campbell, Robert M. ;
Carter, Adrian J. ;
Cohen, Philip ;
Copeland, Robert A. ;
Cravatt, Ben ;
Dahlin, Jayme L. ;
Dhanak, Dashyant ;
Edwards, Aled M. ;
Frye, Stephen V. ;
Gray, Nathanael ;
Grimshaw, Charles E. ;
Hepworth, David ;
Howe, Trevor ;
Huber, Kilian V. M. ;
Jin, Jian ;
Knapp, Stefan ;
Kotz, Joanne D. ;
Kruger, Ryan G. ;
Lowe, Derek ;
Mader, Mary M. ;
Marsden, Brian ;
Mueller-Fahrnow, Anke ;
Mueller, Susanne ;
O'Hagan, Ronan C. ;
Overington, John P. ;
Owen, Dafydd R. ;
Rosenberg, Saul H. ;
Roth, Brian ;
Ross, Ruth ;
Schapira, Matthieu ;
Schreiber, Stuart L. ;
Shoichet, Brian ;
Sundstrom, Michael ;
Superti-Furga, Giulio ;
Taunton, Jack ;
Toledo-Sherman, Leticia ;
Walpole, Chris ;
Walters, Michael A. ;
Willson, Timothy M. .
NATURE CHEMICAL BIOLOGY, 2015, 11 (08) :536-541
[2]
The preferred conformation of α-fluoroamides [J].
Banks, JW ;
Batsanov, AS ;
Howard, JAK ;
O'Hagan, D ;
Rzepa, HS ;
Martin-Santamaria, S .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1999, (11) :2409-2411
[3]
Chemoproteomics profiling of HDAC inhibitors reveals selective targeting of HDAC complexes [J].
Bantscheff, Marcus ;
Hopf, Carsten ;
Savitski, Mikhail M. ;
Dittmann, Antje ;
Grandi, Paola ;
Michon, Anne-Marie ;
Schlegl, Judith ;
Abraham, Yann ;
Becher, Isabelle ;
Bergamini, Giovanna ;
Boesche, Markus ;
Delling, Manja ;
Duempelfeld, Birgit ;
Eberhard, Dirk ;
Huthmacher, Carola ;
Mathieson, Toby ;
Poeckel, Daniel ;
Reader, Valerie ;
Strunk, Katja ;
Sweetman, Gavain ;
Kruse, Ulrich ;
Neubauer, Gitte ;
Ramsden, Nigel G. ;
Drewes, Gerard .
NATURE BIOTECHNOLOGY, 2011, 29 (03) :255-U124
[4]
Bondeson DP, 2015, NAT CHEM BIOL, V11, P611, DOI [10.1038/NCHEMBIO.1858, 10.1038/nchembio.1858]
[5]
The C-F bond as a tool in the conformational control of amides [J].
Briggs, CRS ;
O'Hagan, D ;
Howard, JAK ;
Yufit, DS .
JOURNAL OF FLUORINE CHEMISTRY, 2003, 119 (01) :9-13
[6]
Expression of the gene encoding the proapoptotic Nip3 protein is induced by hypoxia [J].
Bruick, RK .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (16) :9082-9087
[7]
Small-Molecule Inhibitors of the Interaction between the E3 Ligase VHL and HIF1a [J].
Buckley, Dennis L. ;
Gustafson, Jeffrey L. ;
Van Molle, Inge ;
Roth, Anke G. ;
Tae, Hyun Seop ;
Gareiss, Peter C. ;
Jorgensen, William L. ;
Ciulli, Alessio ;
Crews, Craig M. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2012, 51 (46) :11463-11467
[8]
Targeting the von Hippel-Lindau E3 Ubiquitin Ligase Using Small Molecules To Disrupt the VHL/HIF-1α Interaction [J].
Buckley, Dennis L. ;
Van Molle, Inge ;
Gareiss, Peter C. ;
Tae, Hyun Seop ;
Michel, Julien ;
Noblin, Devin J. ;
Jorgensen, William L. ;
Ciulli, Alessio ;
Crews, Craig M. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (10) :4465-4468
[9]
Targeting Cullin-RING E3 ubiquitin ligases for drug discovery: structure, assembly and small-molecule modulation [J].
Bulatov, Emil ;
Ciulli, Alessio .
BIOCHEMICAL JOURNAL, 2015, 467 :365-386
[10]
Target validation using chemical probes [J].
Bunnage, Mark E. ;
Chekler, Eugene L. Piatnitski ;
Jones, Lyn H. .
NATURE CHEMICAL BIOLOGY, 2013, 9 (04) :195-199