Biogenesis and function of nuclear bodies

被引:508
作者
Mao, Yuntao S. [1 ]
Zhang, Bin [1 ]
Spector, David L. [1 ]
机构
[1] Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
基金
美国国家卫生研究院;
关键词
POLYCOMB RESPONSE ELEMENTS; REMODELING COMPLEX NORC; HUMAN TELOMERASE RNA; NONCODING RNA; CAJAL BODIES; PERINUCLEOLAR COMPARTMENT; NUCLEOLAR DOMINANCE; GENE-EXPRESSION; MESSENGER-RNAS; SC-35; DOMAINS;
D O I
10.1016/j.tig.2011.05.006
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Nuclear bodies including nucleoli, Cajal bodies, nuclear speckles, Polycomb bodies, and paraspeckles are membraneless subnuclear organelles. They are present at steady-state and dynamically respond to basic physiological processes as well as to various forms of stress, altered metabolic conditions and alterations in cellular signaling. The formation of a specific nuclear body has been suggested to follow a stochastic or ordered assembly model. In addition, a seeding mechanism has been proposed to assemble, maintain, and regulate particular nuclear bodies. In coordination with noncoding RNAs, chromatin modifiers and other machineries, various nuclear bodies have been shown to sequester and modify proteins, process RNAs and assemble ribonucleoprotein complexes, as well as epigenetically regulate gene expression. Understanding the functional relationships between the 3D organization of the genome and nuclear bodies is essential to fully uncover the regulation of gene expression and its implications for human disease.
引用
收藏
页码:295 / 306
页数:12
相关论文
共 125 条
[31]   PHF8 activates transcription of rRNA genes through H3K4me3 binding and H3K9me1/2 demethylation [J].
Feng, Weijun ;
Yonezawa, Masato ;
Ye, Jing ;
Jenuwein, Thomas ;
Grummt, Ingrid .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2010, 17 (04) :445-U83
[32]   JHDM1B/FBXL10 is a nucleolar protein that represses transcription of ribosomal RNA genes [J].
Frescas, David ;
Guardavaccaro, Daniele ;
Bassermann, Florian ;
Koyama-Nasu, Ryo ;
Pagano, Michele .
NATURE, 2007, 450 (7167) :309-U17
[33]   The nucleolus: a site of ribonucleoprotein maturation [J].
Gerbi, SA ;
Borovjagin, AV ;
Lange, TS .
CURRENT OPINION IN CELL BIOLOGY, 2003, 15 (03) :318-325
[34]   RNAi components are required for nuclear clustering of polycomb group response elements [J].
Grimaud, C ;
Bantignies, F ;
Pal-Bhadra, M ;
Ghana, P ;
Bhadra, U ;
Cavalli, G .
CELL, 2006, 124 (05) :957-971
[35]   Actin and myosin as transcription factors [J].
Grummt, I .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2006, 16 (02) :191-196
[36]   Subnuclear organelles: new insights into form and function [J].
Handwerger, KE ;
Gall, JG .
TRENDS IN CELL BIOLOGY, 2006, 16 (01) :19-26
[37]   Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules [J].
Hu, Qidong ;
Kwon, Young-Soo ;
Nunez, Esperanza ;
Cardamone, Maria Dafne ;
Hutt, Kasey R. ;
Ohgi, Kenneth A. ;
Garcia-Bassets, Ivan ;
Rose, David W. ;
Glass, Christopher K. ;
Rosenfeld, Michael G. ;
Fu, Xiang-Dong .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (49) :19199-19204
[38]   The dynamic organization of the perinucleolar compartment in the cell nucleus [J].
Huang, S ;
Deerinck, TJ ;
Ellisman, MH ;
Spector, DL .
JOURNAL OF CELL BIOLOGY, 1997, 137 (05) :965-974
[39]   Perinucleolar structures [J].
Huang, S .
JOURNAL OF STRUCTURAL BIOLOGY, 2000, 129 (2-3) :233-240
[40]  
HUANG S, 1991, Genes and Development, V5, P2288, DOI 10.1101/gad.5.12a.2288