Genomic Exploration of the Hemiascomycetous Yeasts:: 13.: Pichia angusta

被引:34
作者
Blandin, G
Llorente, B
Malpertuy, A
Wincker, P
Artiguenave, F
Dujon, B
机构
[1] Univ Paris 06, CNRS, URA 2171,Unite Genet Mol Levures, Inst Pasteur,UFR 927,Dept Biotechnol, F-75724 Paris 15, France
[2] Genoscope, F-91000 Evry, France
来源
FEBS LETTERS | 2000年 / 487卷 / 01期
关键词
genomic library; retrotransposon; intron;
D O I
10.1016/S0014-5793(00)02284-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
As part of a comparative genomics project on 13 hemiascomycetous yeasts, the Pichia angusta type strain was studied using a partial random sequencing strategy. With coverage of 0.5 genome equivalents, about 2500 novel protein-coding genes were identified, probably corresponding to more than half of the P. angusta protein-coding genes, 6% of which do not have homologs in Saccharomyces cervisiae. Some of them contain one or two introns, on average three times shorter than those in S.cervisiae. We also identified 28 tRNA genes, a few retrotransposons similar to Ty5 of S.cervisiae, solo long terminal repeats, the whole ribosomal DNA cluster, and segments of mitochondrial DNA. The P, augusta sequences were deposited in EMBL under the accession numbers AL430961 to AL436044. (C) 2000 Federation of European Biochemical Societies. Published by Elsevier Science B.V. All rights reserved.
引用
收藏
页码:76 / 81
页数:6
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