MukB acts as a macromolecular clamp in DNA condensation

被引:72
作者
Cui, Yuanbo [1 ]
Petrushenko, Zoya M. [1 ]
Rybenkov, Valentin V. [1 ]
机构
[1] Univ Oklahoma, Dept Chem & Biochem, Norman, OK 73019 USA
关键词
D O I
10.1038/nsmb.1410
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Correct folding of the chromosome into its highly ordered structure requires the action of condensins. The multisubunit condensins are highly conserved from bacteria to humans, and at their core they contain the characteristic V-shaped dimer of structural maintenance of chromosome proteins. The mechanism of DNA rearrangements by condensins remains unclear. Using magnetic tweezers, we show that bacterial condensin MukB acts as an ATP-modulated macromolecular assemblage in DNA condensation. Condensation occurs in a highly cooperative manner, resulting in the formation of force-resilient clusters. ATP regulates nucleation but not propagation of the clusters and seems to play a structural role. MukB clusters can further interact with each other, thereby bringing distant DNA segments together. The resulting activity has not previously been described among DNA-remodeling machines and may explain how the protein can organize the global structure of the chromosome.
引用
收藏
页码:411 / 418
页数:8
相关论文
共 60 条
[1]   Condensin and cohesin display different arm conformations with characteristic hinge angles [J].
Anderson, DE ;
Losada, A ;
Erickson, HP ;
Hirano, T .
JOURNAL OF CELL BIOLOGY, 2002, 156 (03) :419-424
[2]  
[Anonymous], ESCHERICHIA COLI SAL
[3]   Stretching of single collapsed DNA molecules [J].
Baumann, CG ;
Bloomfield, VA ;
Smith, SB ;
Bustamante, C ;
Wang, MD ;
Block, SM .
BIOPHYSICAL JOURNAL, 2000, 78 (04) :1965-1978
[4]   Unfolding individual nucleosomes by stretching single chromatin fibers with optical tweezers [J].
Bennink, ML ;
Leuba, SH ;
Leno, GH ;
Zlatanova, J ;
de Grooth, BG ;
Greve, J .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (07) :606-610
[5]   Role of tension and twist in single-molecule DNA condensation [J].
Besteman, K. ;
Hage, S. ;
Dekker, N. H. ;
Lemay, S. G. .
PHYSICAL REVIEW LETTERS, 2007, 98 (05)
[6]   Estimating the persistence length of a worm-like chain molecule from force-extension measurements [J].
Bouchiat, C ;
Wang, MD ;
Allemand, JF ;
Strick, T ;
Block, SM ;
Croquette, V .
BIOPHYSICAL JOURNAL, 1999, 76 (01) :409-413
[7]   The evolution of SMC proteins: Phylogenetic analysis and structural implications [J].
Cobbe, N ;
Heck, MMS .
MOLECULAR BIOLOGY AND EVOLUTION, 2004, 21 (02) :332-347
[8]   Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure [J].
Cui, Y ;
Bustamante, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (01) :127-132
[9]   Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation [J].
Dame, Remus T. ;
Noom, Maarten C. ;
Wuite, Gijs J. L. .
NATURE, 2006, 444 (7117) :387-390
[10]   Human Rad50/Mre11 is a flexible complex that can tether DNA ends [J].
de Jager, M ;
van Noort, J ;
van Gent, DC ;
Dekker, C ;
Kanaar, R ;
Wyman, C .
MOLECULAR CELL, 2001, 8 (05) :1129-1135