Incomplete penetrance and variable expressivity: is there a microRNA connection?

被引:27
作者
Ahluwalia, Jasmine K. [1 ,2 ]
Hariharan, Manoj [2 ]
Bargaje, Rhishikesh [2 ]
Pillai, Beena [2 ]
Brahmachari, Vani [1 ]
机构
[1] Univ Delhi, Dr BR Ambedkar Ctr Biomed Res, Delhi 110007, India
[2] CSIR, Inst Genom & Integrat Biol, Delhi, India
关键词
epigenetics; incomplete penetrance; MicroRNA; modifier; variable expressivity; TRANSCRIPTIONAL REGULATION; GENE-EXPRESSION; MESSENGER-RNA; VAS-DEFERENS; TARGETS; ALLELE; MUTATIONS; METHYLATION; PREDICTION; IDENTIFICATION;
D O I
10.1002/bies.200900066
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Incomplete penetrance and variable expressivity are non-Mendelian phenomena resulting in the lack of correlation between genotype and phenotype. Not withstanding the diversity in mechanisms, differential expression of homologous alleles within cells manifests as variations in penetrance and expressivity of mutations between individuals of the same genotype. These phenomena are seen most often in dominantly inherited diseases, implying that they are sensitive to concentration of the gene product. In this framework and the advances in understanding the role of microRNA (miRNA) in fine-tuning gene expression at translational level, we propose miRNA-mediated regulation as a mechanism for incomplete penetrance and variable expressivity. The presence of miRNA binding sites at 3' UTR, co-expression of target gene-miRNA pairs for genes showing incomplete penetrance and variable expressivity derived from available data lend support to our hypothesis. Single nucleotide polymorphisms in the miRNA target site facilitate the implied differential targeting of the transcripts from homologous alleles.
引用
收藏
页码:981 / 992
页数:12
相关论文
共 77 条
[61]   Identification of mammalian microRNA host genes and transcription units [J].
Rodriguez, A ;
Griffiths-Jones, S ;
Ashurst, JL ;
Bradley, A .
GENOME RESEARCH, 2004, 14 (10A) :1902-1910
[62]   Distance constraints between microRNA target sites dictate efficacy and cooperativity [J].
Saetrom, Pal ;
Heale, Bret S. E. ;
Snove, Ola, Jr. ;
Aagaard, Lars ;
Alluin, Jessica ;
Rossi, John J. .
NUCLEIC ACIDS RESEARCH, 2007, 35 (07) :2333-2342
[63]   Genome regulation by polycomb and trithorax proteins [J].
Schuettengruber, Bernd ;
Chourrout, Daniel ;
Vervoort, Michel ;
Leblanc, Benjamin ;
Cavalli, Giacomo .
CELL, 2007, 128 (04) :735-745
[64]   Mammalian microRNAs: a small world for fine-tuning gene expression [J].
Sevignani, C ;
Calin, GA ;
Siracusa, LD ;
Croce, CM .
MAMMALIAN GENOME, 2006, 17 (03) :189-202
[65]   Evidence for a novel x-linked modifier locus for leber hereditary optic neuropathy [J].
Shankar, Suma P. ;
Fingert, John H. ;
Carelli, Valerio ;
Valentino, Maria L. ;
King, Terri M. ;
Daiger, Stephen P. ;
Salomao, Solange R. ;
Berezovsky, Adriana ;
Belfort, Rubens, Jr. ;
Braun, Terri A. ;
Sheffield, Val C. ;
Sadun, Alfredo A. ;
Stone, Edwin M. .
OPHTHALMIC GENETICS, 2008, 29 (01) :17-24
[66]   Congenital absence of the vas deferens: Incomplete penetrance of cystic fibrosis gene mutations [J].
Shin, D ;
Gilbert, F ;
Goldstein, M ;
Schlegel, PN .
JOURNAL OF UROLOGY, 1997, 158 (05) :1794-1798
[67]   Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor [J].
So, Alex Yick-Lun ;
Chaivorapol, Christina ;
Bolton, Eric C. ;
Li, Hao ;
Yamamoto, Keith R. .
PLOS GENETICS, 2007, 3 (06) :927-938
[68]   Animal microRNAs confer robustness to gene expression and have a significant impact on 3′UTR evolution [J].
Stark, A ;
Brennecke, J ;
Bushati, N ;
Russell, RB ;
Cohen, SM .
CELL, 2005, 123 (06) :1133-1146
[69]  
Stern C, 1960, Am J Hum Genet, V12, P141
[70]   Genetic and epigenetic regulators of pluripotency [J].
Surani, M. Azim ;
Hayashi, Katsuhiko ;
Hajkova, Petra .
CELL, 2007, 128 (04) :747-762