Resonant Mie Scattering (RMieS) correction of infrared spectra from highly scattering biological samples

被引:318
作者
Bassan, Paul [1 ]
Kohler, Achim [2 ,3 ]
Martens, Harald [2 ,3 ]
Lee, Joe [1 ]
Byrne, Hugh J. [4 ]
Dumas, Paul [5 ]
Gazi, Ehsan [6 ]
Brown, Michael [6 ]
Clarke, Noel [6 ,7 ,8 ]
Gardner, Peter [1 ]
机构
[1] Univ Manchester, Manchester Interdisciplinary Bioctr, Sch Chem Engn & Analyt Sci, Manchester M1 7DN, Lancs, England
[2] Nofima Mat, Ctr Biospect & Data Modelling, N-1430 As, Norway
[3] Norwegian Univ Life Sci, Dept Math Sci & Technol, CIGENE, N-1430 As, Norway
[4] Dublin Inst Technol, Facas Res Inst, Dublin 8, Ireland
[5] Synchrotron SOLEIL, F-91192 Gif Sur Yvette, France
[6] Univ Manchester, Manchester Acad Hlth Sci Ctr, Christie NHS Fdn Trust,Genito Urinary Canc Res Gr, Paterson Inst Canc Res,Sch Canc Enabling Sci & Te, Manchester M20 4BX, Lancs, England
[7] Christie NHS Fdn Trust, Dept Urol, Manchester M20 4BX, Lancs, England
[8] Salford Royal NHS Fdn Trust, Dept Urol, Salford M6 8HD, Lancs, England
基金
英国工程与自然科学研究理事会;
关键词
PROSTATE-CANCER CELLS; MICRO-SPECTROSCOPY; IR MICROSPECTROSCOPY; SINGLE CELLS;
D O I
10.1039/b921056c
中图分类号
O65 [分析化学];
学科分类号
070302 [分析化学];
摘要
Infrared spectra of single biological cells often exhibit the 'dispersion artefact' observed as a sharp decrease in intensity on the high wavenumber side of absorption bands, in particular the Amide I band at similar to 1655 cm(-1), causing a downward shift of the true peak position. The presence of this effect makes any biochemical interpretation of the spectra unreliable. Recent theory has shed light on the origins of the 'dispersion artefact' which has been attributed to resonant Mie scattering (RMieS). In this paper a preliminary algorithm for correcting RMieS is presented and evaluated using simulated data. Results show that the 'dispersion artefact' appears to be removed; however, the correction is not perfect. An iterative approach was subsequently implemented whereby the reference spectrum is improved after each iteration, resulting in a more accurate correction. Consequently the corrected spectra become increasingly more representative of the pure absorbance spectra. Using this correction method reliable peak positions can be obtained.
引用
收藏
页码:268 / 277
页数:10
相关论文
共 35 条
[1]
BASSAN P, IN PRESS
[2]
Resonant Mie scattering in infrared spectroscopy of biological materials - understanding the 'dispersion artefact' [J].
Bassan, Paul ;
Byrne, Hugh J. ;
Bonnier, Franck ;
Lee, Joe ;
Dumas, Paul ;
Gardner, Peter .
ANALYST, 2009, 134 (08) :1586-1593
[3]
Reflection contributions to the dispersion artefact in FTIR spectra of single biological cells [J].
Bassan, Paul ;
Byrne, Hugh J. ;
Lee, Joe ;
Bonnier, Franck ;
Clarke, Colin ;
Dumas, Paul ;
Gazi, Ehsan ;
Brown, Michael D. ;
Clarke, Noel W. ;
Gardner, Peter .
ANALYST, 2009, 134 (06) :1171-1175
[4]
Cytology by infrared micro-spectroscopy: Automatic distinction of cell types in urinary cytology [J].
Bird, Benjamin ;
Romeo, Melissa J. ;
Diem, Max ;
Bedrossian, Kristi ;
Laver, Nora ;
Naber, Stephen .
VIBRATIONAL SPECTROSCOPY, 2008, 48 (01) :101-106
[5]
Boydston-White S, 1999, BIOSPECTROSCOPY, V5, P219, DOI 10.1002/(SICI)1520-6343(1999)5:4<219::AID-BSPY2>3.0.CO
[6]
2-O
[7]
Synchrotron infrared microscopy at the French Synchrotron Facility SOLEIL [J].
Dumas, P. ;
Polack, F. ;
Lagarde, B. ;
Chubar, O. ;
Giorgetta, J. L. ;
Lefrancois, S. .
INFRARED PHYSICS & TECHNOLOGY, 2006, 49 (1-2) :152-160
[8]
Imaging capabilities of synchrotron infrared microspectroscopy [J].
Dumas, P ;
Jamin, N ;
Teillaud, JL ;
Miller, LM ;
Beccard, B .
FARADAY DISCUSSIONS, 2004, 126 :289-302
[9]
The use of synchrotron infrared microspectroscopy in biological and biomedical investigations [J].
Dumas, P ;
Miller, L .
VIBRATIONAL SPECTROSCOPY, 2003, 32 (01) :3-21
[10]
Fowler LJ, 2008, ARCH PATHOL LAB MED, V132, P373, DOI 10.1043/1543-2165(2008)132[373:AOITC]2.0.CO