Imaging Transcription in Living Cells

被引:90
作者
Darzacq, Xavier [1 ,2 ]
Yao, Jie [1 ,3 ]
Larson, Daniel R. [1 ,4 ]
Causse, Sebastien Z. [1 ,2 ]
Bosanac, Lana [1 ,2 ]
de Turris, Valeria [1 ,4 ]
Ruda, Vera M. [1 ,2 ]
Lionnet, Timothee [1 ,4 ]
Zenklusen, Daniel [1 ,4 ]
Guglielmi, Benjamin [1 ,3 ]
Tjian, Robert [1 ,3 ]
Singer, Robert H. [1 ,4 ]
机构
[1] Howard Hughes Med Inst, Janelia Farm Res Consortium Imaging Transcript, Ashburn, VA 20147 USA
[2] Ecole Normale Super, CNRS, UMR 8541, F-75230 Paris 5, France
[3] Univ Calif Berkeley, Howard Hughes Med Inst, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
[4] Yeshiva Univ, Albert Einstein Coll Med, Dept Anat & Struct Biol, Gruss Lipper Biophoton Ctr, Bronx, NY 10461 USA
关键词
modeling; RNA synthesis in live cells; polymerase kinetics; RNA-POLYMERASE-II; LIGAND-SPECIFIC DYNAMICS; MESSENGER-RNA; GLUCOCORTICOID-RECEPTOR; GENE-EXPRESSION; REAL-TIME; FLUORESCENCE RECOVERY; NUCLEAR PERIPHERY; P-TEFB; PHOTOBLEACHING FRAP;
D O I
10.1146/annurev.biophys.050708.133728
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
The advent of new technologies for the imaging of living cells has made it possible to determine the properties of transcription the kinetics of, polymerase movement, the association of transcription factors, and the progression of the polymerase on the gene. We report here the current state of the field and the progress necessary to achieve a more complete understanding of the various steps in transcription. Our Consortium is dedicated to developing and implementing the technology to further this understanding.
引用
收藏
页码:173 / 196
页数:24
相关论文
共 99 条
[1]  
Abramowitz M., 1964, HDB MATH FUNCTIONS, V55
[2]   3′-end formation signals modulate the association of genes with the nuclear periphery as well as mRNP dot formation [J].
Abruzzi, Katharine C. ;
Belostotsky, Dmitry A. ;
Chekanova, Julia A. ;
Dower, Ken ;
Rosbash, Michael .
EMBO JOURNAL, 2006, 25 (18) :4253-4262
[3]   The nuclear envelope and transcriptional control [J].
Akhtar, Asifa ;
Gasser, Susan M. .
NATURE REVIEWS GENETICS, 2007, 8 (07) :507-517
[4]   MOBILITY MEASUREMENT BY ANALYSIS OF FLUORESCENCE PHOTOBLEACHING RECOVERY KINETICS [J].
AXELROD, D ;
KOPPEL, DE ;
SCHLESSINGER, J ;
ELSON, E ;
WEBB, WW .
BIOPHYSICAL JOURNAL, 1976, 16 (09) :1055-1069
[5]   Localization and anchoring of mRNA in budding yeast [J].
Beach, DL ;
Salmon, ED ;
Bloom, K .
CURRENT BIOLOGY, 1999, 9 (11) :569-578
[6]   Dynamic behavior of transcription factors on a natural promoter in living cells [J].
Becker, M ;
Baumann, C ;
John, S ;
Walker, DA ;
Vigneron, M ;
McNally, JG ;
Hager, GL .
EMBO REPORTS, 2002, 3 (12) :1188-1194
[7]   Localization of ASH1 mRNA particles in living yeast [J].
Bertrand, E ;
Chartrand, P ;
Schaefer, M ;
Shenoy, SM ;
Singer, RH ;
Long, RM .
MOLECULAR CELL, 1998, 2 (04) :437-445
[8]   The transcriptional cycle of HIV-1 in real-time and live cells [J].
Boireau, Stephanie ;
Maiuri, Paolo ;
Basyuk, Eugenia ;
de la Mata, Manuel ;
Knezevich, Anna ;
Pradet-Balade, Berangere ;
Baecker, Volker ;
Kornblihtt, Alberto ;
Marcello, Alessandro ;
Bertrand, Edouard .
JOURNAL OF CELL BIOLOGY, 2007, 179 (02) :291-304
[9]   A hyper-dynamic equilibrium between promoter-bound and nucleoplasmic dimers controls NF-κB-dependent gene activity [J].
Bosisio, D ;
Marazzi, I ;
Agresti, A ;
Shimizu, N ;
Bianchi, ME ;
Natoli, G .
EMBO JOURNAL, 2006, 25 (04) :798-810
[10]   The multi-tasking P-TEFb complex [J].
Bres, Vanessa ;
Yoh, Sunnie M. ;
Jones, Katherine A. .
CURRENT OPINION IN CELL BIOLOGY, 2008, 20 (03) :334-340