Heavy metal transporters in Hemiascomycete yeasts

被引:15
作者
Diffels, J. F.
Seret, M. -L.
Goffeau, A.
Baret, P. V.
机构
[1] Univ Catholique Louvain, Fac Ingn Biol Agron & Environm, Unite Genet GENA, B-1348 Louvain, Belgium
[2] Univ Catholique Louvain, Fac Ingn Biol Agron & Environm, Unite Biochim Physiol FYSA, Inst Sci Vie, B-1348 Louvain, Belgium
关键词
heavy metals; hemiascomycetes; transporters; transport classification;
D O I
10.1016/j.biochi.2006.08.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have compiled all known heavy metal transporters of the yeast Saccharomyces cerevisiae and identified their orthologs in four other species spanning the entire Hemiascomycete phylum. The 213 transporters belong to 27 distinct phylogenetic families distributed within the three classes: channels, secondary porters (permeases) and transport ATPases. They are present in all cellular membranes: plasma membranes, vacuoles, mitochondria, endoplasmic reticulum, nucleus, Golgi and various cytoplasmic vesicles. The major physiological heavy metals transported are: iron, manganese, zinc, copper, arsenite and cadmium. The major subfamilies that comprise the highest number of transporters are Siderophore-Iron Transporters (SIT) and CT2 (conjugated ABC transporters). They transport heavy metals (iron or cadmium, respectively) conjugated to organic chelators such as siderophores or glutathione. Both subfamilies are considerably amplified in the yeast Yarrowia lipolytica. The pattern of expansion and restriction of the subfamilies during the evolution of the different species is highly variable. The phylogenetic trees of the major transporters subfamilies distinguish homogenous clusters of transporters suggesting that possible different physiological or mechanistic functions evolved independently. We also validated the use of the Herniascomycetes heavy metal transporters for identification of orthologs transporters in the pathogenic Basidiomycetes Cryptococcus neoformans. (c) 2006 Elsevier Masson SAS. All rights reserved.
引用
收藏
页码:1639 / 1649
页数:11
相关论文
共 16 条
[1]   The Nramp orthologue of Cryptococcus neoformans is a pH-dependent transporter of manganese, iron, cobalt and nickel [J].
Agranoff, D ;
Collins, L ;
Kehres, D ;
Harrison, T ;
Maguire, M ;
Krishna, S .
BIOCHEMICAL JOURNAL, 2005, 385 (01) :225-232
[2]   Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[3]   Emergence of species-specific transporters during evolution of the Hemiascomycete phylum [J].
De Hertogh, B ;
Hancy, F ;
Goffeau, A ;
Baret, PV .
GENETICS, 2006, 172 (02) :771-781
[4]   Genome evolution in yeasts [J].
Dujon, B ;
Sherman, D ;
Fischer, G ;
Durrens, P ;
Casaregola, S ;
Lafontaine, I ;
de Montigny, J ;
Marck, C ;
Neuvéglise, C ;
Talla, E ;
Goffard, N ;
Frangeul, L ;
Aigle, M ;
Anthouard, V ;
Babour, A ;
Barbe, V ;
Barnay, S ;
Blanchin, S ;
Beckerich, JM ;
Beyne, E ;
Bleykasten, C ;
Boisramé, A ;
Boyer, J ;
Cattolico, L ;
Confanioleri, F ;
de Daruvar, A ;
Despons, L ;
Fabre, E ;
Fairhead, C ;
Ferry-Dumazet, H ;
Groppi, A ;
Hantraye, F ;
Hennequin, C ;
Jauniaux, N ;
Joyet, P ;
Kachouri, R ;
Kerrest, A ;
Koszul, R ;
Lemaire, M ;
Lesur, I ;
Ma, L ;
Muller, H ;
Nicaud, JM ;
Nikolski, M ;
Oztas, S ;
Ozier-Kalogeropoulos, O ;
Pellenz, S ;
Potier, S ;
Richard, GF ;
Straub, ML .
NATURE, 2004, 430 (6995) :35-44
[5]   A systematic nomenclature of chromosomal elements for hemiascomycete yeasts [J].
Durrens, P ;
Sherman, DJ .
YEAST, 2005, 22 (05) :337-342
[6]  
Felsenstein J., 2005, PHYLIP PHYLOGENY INF, DOI DOI 10.1111/J.1096-0031.1989.TB00562.X
[7]  
Goffeau A., 1996, SCIENCE, V274, p[546, 563]
[8]  
HONG E, SACCHAROMYCES GENOME
[9]   Siderophore uptake and use by the yeast Saccharomyces cerevisiae [J].
Lesuisse, E ;
Blaiseau, PL ;
Dancis, A ;
Camadro, JM .
MICROBIOLOGY-UK, 2001, 147 :289-298
[10]   The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans [J].
Loftus, BJ ;
Fung, E ;
Roncaglia, P ;
Rowley, D ;
Amedeo, P ;
Bruno, D ;
Vamathevan, J ;
Miranda, M ;
Anderson, IJ ;
Fraser, JA ;
Allen, JE ;
Bosdet, IE ;
Brent, MR ;
Chiu, R ;
Doering, TL ;
Dontin, MJ ;
D'Souza, CA ;
Fox, DS ;
Grinberg, V ;
Fu, JM ;
Fukushima, M ;
Haas, BJ ;
Huang, JC ;
Janbon, G ;
Jones, SJM ;
Koo, HL ;
Krzywinski, MI ;
Kwon-Chung, JK ;
Lengeler, KB ;
Maiti, R ;
Marra, MA ;
Marra, RE ;
Mathewson, CA ;
Mitchell, TG ;
Pertea, M ;
Riggs, FR ;
Salzberg, SL ;
Schein, JE ;
Shvartsbeyn, A ;
Shin, H ;
Shumway, M ;
Specht, CA ;
Suh, BB ;
Tenney, A ;
Utterback, TR ;
Wickes, BL ;
Wortman, JR ;
Wye, NH ;
Kronstad, JW ;
Lodge, JK .
SCIENCE, 2005, 307 (5713) :1321-1324