Therapeutic target database update 2016: enriched resource for bench to clinical drug target and targeted pathway information

被引:235
作者
Yang, Hong [1 ,2 ,3 ,4 ]
Qin, Chu [1 ,2 ]
Li, Ying Hong [3 ,4 ]
Tao, Lin [1 ,2 ]
Zhou, Jin [3 ,4 ]
Yu, Chun Yan [3 ,4 ]
Xu, Feng [5 ,6 ]
Chen, Zhe [7 ]
Zhu, Feng [1 ,2 ,3 ,4 ]
Chen, Yu Zong [1 ,2 ]
机构
[1] Natl Univ Singapore, Dept Pharm, Bioinformat & Drug Design Grp, Singapore 117543, Singapore
[2] Natl Univ Singapore, Ctr Computat Sci & Engn, Singapore 117543, Singapore
[3] Chongqing Univ, Innovat Drug Res Ctr, Chongqing 401331, Peoples R China
[4] Chongqing Univ, Coll Chem & Chem Engn, Chongqing 401331, Peoples R China
[5] Nankai Univ, Coll Pharm, State Key Lab Med Chem Biol, Tianjin 300071, Peoples R China
[6] Nankai Univ, Tianjin Key Lab Mol Drug Res, Tianjin 300071, Peoples R China
[7] Zhejiang Chinese Med Univ, Zhejiang Hosp Tradit Chinese Med, Zhejiang Key Lab Gastrointestinal Pathophysiol, 54 Youdian Rd, Hangzhou 310006, Zhejiang, Peoples R China
基金
中国国家自然科学基金;
关键词
RESEARCH-AND-DEVELOPMENT; LUNG-CANCER; PHARMACOLOGY; DISCOVERY; PRODUCTIVITY; METABOLISM; MECHANISMS; OPINION; BIOLOGY; GENES;
D O I
10.1093/nar/gkv1230
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Extensive drug discovery efforts have yielded many approved and candidate drugs targeting various targets in different biological pathways. Several freely accessible databases provide the drug, target and drug-targeted pathway information for facilitating drug discovery efforts, but there is an insufficient coverage of the clinical trial drugs and the drug-targeted pathways. Here, we describe an update of the Therapeutic Target Database (TTD) previously featured in NAR. The updated contents include: (i) significantly increased coverage of the clinical trial targets and drugs (1.6 and 2.3 times of the previous release, respectively), (ii) cross-links of most TTD target and drug entries to the corresponding pathway entries of KEGG, MetaCyc/BioCyc, NetPath, PANTHER pathway, Pathway Interaction Database (PID), PathWhiz, Reactome and WikiPathways, (iii) the convenient access of the multiple targets and drugs cross-linked to each of these pathway entries and (iv) the recently emerged approved and investigative drugs. This update makes TTD a more useful resource to complement other databases for facilitating the drug discovery efforts. TTD is accessible at http://bidd.nus.edu.sg/group/ttd/ttd.asp.
引用
收藏
页码:D1069 / D1074
页数:6
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