Functions and Regulation of RNA Editing by ADAR Deaminases

被引:940
作者
Nishikura, Kazuko [1 ]
机构
[1] Wistar Inst Anat & Biol, Dept Gene Express & Regulat, Philadelphia, PA 19104 USA
来源
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 | 2010年 / 79卷
关键词
double-stranded RNA; A -> I RNA editing; noncoding RNA; RNA interference; microRNA; esiRNA; DOUBLE-STRANDED-RNA; PRE-MESSENGER-RNA; DNA BINDING DOMAIN; I-EDITED RNAS; ADENOSINE-DEAMINASE; GENE-EXPRESSION; GLUR-B; UNWINDING ACTIVITY; MAMMALIAN-CELLS; ENZYME ADAR1;
D O I
10.1146/annurev-biochem-060208-105251
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
One type of RNA editing converts adenosines to inosines (A -> I editing) in double-stranded RNA (dsRNA) substrates. A -> I RNA editing is mediated by adenosine deaminase acting on RNA (ADAR) enzymes. A -> I RNA editing of protein-coding sequences of a limited number of mammalian genes results in recoding and subsequent alterations of their functions. However, A -> I RNA editing most frequently targets repetitive RNA sequences located within introns and 5' and 3' untranslated regions (UTRs). Although the biological significance of noncoding RNA editing remains largely unknown, several possibilities, including its role in the control of endogenous short interfering RNAs (esiRNAs), have been proposed. Furthermore, recent studies have revealed that the biogenesis and functions of certain microRNAs (miRNAs) are regulated by the editing of their precursors. Here, I review the recent findings that indicate new functions for A -> I editing in the regulation of noncoding RNAs and for interactions between RNA editing and RNA interference mechanisms.
引用
收藏
页码:321 / 349
页数:29
相关论文
共 155 条
[81]   Mechanisms of gene silencing by double-stranded RNA [J].
Meister, G ;
Tuschl, T .
NATURE, 2004, 431 (7006) :343-349
[82]   RED2, a brain-specific member of the RNA-specific adenosine deaminase family [J].
Melcher, T ;
Maas, S ;
Herb, A ;
Sprengel, R ;
Higuchi, M ;
Seeburg, PH .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (50) :31795-31798
[83]   A mammalian RNA editing enzyme [J].
Melcher, T ;
Maas, S ;
Herb, A ;
Sprengel, R ;
Seeburg, PH ;
Higuchi, M .
NATURE, 1996, 379 (6564) :460-464
[84]   Mutations of the RNA-specific adenosine deaminase gene (DSRAD) are involved in dyschromatosis symmetrica hereditaria [J].
Miyamura, Y ;
Suzuki, T ;
Kono, M ;
Inagaki, K ;
Ito, S ;
Suzuki, N ;
Tomita, Y .
AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 73 (03) :693-699
[85]   Beyond DNA:: RNA editing and steps toward Alu exonization in primates [J].
Moeller-Krull, Maren ;
Zemann, Anja ;
Roos, Christian ;
Brosius, Juergen ;
Schmitz, Juergen .
JOURNAL OF MOLECULAR BIOLOGY, 2008, 382 (03) :601-609
[86]   RNA editing level in the mouse is determined by the genomic repeat repertoire [J].
Neeman, Yossef ;
Levanon, Erez Y. ;
Jantsch, Michael F. ;
Eisenberg, Eli .
RNA, 2006, 12 (10) :1802-1809
[87]   ADAR1 interacts with NF90 through double-stranded RNA and regulates NF90-mediated gene expression independently of RNA editing [J].
Nie, YZ ;
Ding, L ;
Kao, PN ;
Braun, R ;
Yang, JH .
MOLECULAR AND CELLULAR BIOLOGY, 2005, 25 (16) :6956-6963
[88]   SUBSTRATE-SPECIFICITY OF THE DSRNA UNWINDING MODIFYING ACTIVITY [J].
NISHIKURA, K ;
YOO, C ;
KIM, U ;
MURRAY, JM ;
ESTES, PA ;
CASH, FE ;
LIEBHABER, SA .
EMBO JOURNAL, 1991, 10 (11) :3523-3532
[89]   Editor meets silencer: crosstalk between RNA editing and RNA interference [J].
Nishikura, Kazuko .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2006, 7 (12) :919-931
[90]   RNA editing of the human serotonin 5-Hydroxytryptamine 2C receptor silences constitutive activity [J].
Niswender, CM ;
Copeland, SC ;
Herrick-Davis, K ;
Emeson, RB ;
Sanders-Bush, E .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (14) :9472-9478