CRYSTAL-STRUCTURE OF THE RIBOSOMAL-PROTEIN S6 FROM THERMUS-THERMOPHILUS

被引:156
作者
LINDAHL, M
SVENSSON, LA
LILJAS, A
SEDELNIKOVA, SE
ELISEIKINA, IA
FOMENKOVA, NP
NEVSKAYA, N
NIKONOV, SV
GARBER, MB
MURANOVA, TA
RYKONOVA, AI
AMONS, R
机构
[1] LUND UNIV,CTR CHEM,S-22101 LUND,SWEDEN
[2] RUSSIAN ACAD SCI,INST PROT RES,142292 PUSHCHINO,RUSSIA
[3] RUSSIAN ACAD SCI,INST BIOORGAN CHEM,142292 PUSHCHINO,RUSSIA
[4] LEIDEN UNIV,DEPT MED BIOCHEM,2300 RA LEIDEN,NETHERLANDS
关键词
AMINO ACID SEQUENCE; RIBOSOMAL PROTEINS; RNA INTERACTION; X-RAY CRYSTALLOGRAPHY;
D O I
10.1002/j.1460-2075.1994.tb06376.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The amino acid sequence and crystal structure of the ribosomal protein S6 from the small ribosomal subunit of Thermus thermophilus have been determined. S6 is a small protein with 101 amino acid residues. The 3D structure, which was determined to 2.0 angstrom resolution, consists of a four-stranded anti-parallel beta-sheet with two alpha-helices packed on one side. Similar folding patterns have been observed for other ribosomal proteins and may suggest an original RNA-interacting motif. Related topologies are also found in several other nucleic acid-interacting proteins and based on the assumption that the structure of the ribosome was established early in the molecular evolution, the possibility that an ancestral RNA-interacting motif in ribosomal proteins is the evolutionary origin for the nucleic acid-interacting domain in large classes of ribonucleic acid binding proteins should be considered.
引用
收藏
页码:1249 / 1254
页数:6
相关论文
共 46 条
[11]   CRYSTAL-STRUCTURE AT 1.7-ANGSTROM OF THE BOVINE PAPILLOMAVIRUS-1 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET [J].
HEGDE, RS ;
GROSSMAN, SR ;
LAIMINS, LA ;
SIGLER, PB .
NATURE, 1992, 359 (6395) :505-512
[12]  
HELD WA, 1974, J BIOL CHEM, V249, P3103
[13]   PRIMARY STRUCTURE OF RIBOSOMAL-PROTEIN S6 FROM WILD-TYPE AND A MUTANT OF ESCHERICHIA-COLI [J].
HITZ, H ;
SCHAFER, D ;
WITTMANNLIEBOLD, B .
FEBS LETTERS, 1975, 56 (02) :259-262
[14]   CRYSTAL-STRUCTURE OF PROKARYOTIC RIBOSOMAL-PROTEIN L9 - A BILOBED RNA-BINDING PROTEIN [J].
HOFFMAN, DW ;
DAVIES, C ;
GERCHMAN, SE ;
KYCIA, JH ;
PORTER, SJ ;
WHITE, SW ;
RAMAKRISHNAN, V .
EMBO JOURNAL, 1994, 13 (01) :205-212
[15]   RNA-BINDING DOMAIN OF THE A-PROTEIN COMPONENT OF THE U1 SMALL NUCLEAR RIBONUCLEOPROTEIN ANALYZED BY NMR-SPECTROSCOPY IS STRUCTURALLY SIMILAR TO RIBOSOMAL-PROTEINS [J].
HOFFMAN, DW ;
QUERY, CC ;
GOLDEN, BL ;
WHITE, SW ;
KEENE, JD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (06) :2495-2499
[16]   IDENTIFICATION OF MOLECULAR CONTACTS BETWEEN THE U1-A SMALL NUCLEAR RIBONUCLEOPROTEIN AND U1 RNA [J].
JESSEN, TH ;
OUBRIDGE, C ;
TEO, CH ;
PRITCHARD, C ;
NAGAI, K .
EMBO JOURNAL, 1991, 10 (11) :3447-3456
[17]   IMPROVED METHODS FOR BUILDING PROTEIN MODELS IN ELECTRON-DENSITY MAPS AND THE LOCATION OF ERRORS IN THESE MODELS [J].
JONES, TA ;
ZOU, JY ;
COWAN, SW ;
KJELDGAARD, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 :110-119
[18]   SEQUENCE HOMOLOGIES AMONG ESCHERICHIA-COLI RIBOSOMAL-PROTEINS - EVIDENCE FOR EVOLUTIONARILY RELATED GROUPINGS AND INTERNAL DUPLICATIONS [J].
JUE, RA ;
WOODBURY, NW ;
DOOLITTLE, RF .
JOURNAL OF MOLECULAR EVOLUTION, 1980, 15 (02) :129-140
[20]   AUTOMATIC-INDEXING OF ROTATION DIFFRACTION PATTERNS [J].
KABSCH, W .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1988, 21 :67-71