NOVEL GENOTYPES OF HEPATITIS-C VIRUS IN THAILAND

被引:19
作者
SUGIYAMA, K
KATO, N
NAKAZAWA, T
YONEMURA, Y
PHORNPHUTKUL, K
KUNAKORN, M
PETCHCLAI, B
SHIMOTOHNO, K
机构
[1] NATL CANC CTR,RES INST,DIV VIROL,CHUO KU,TOKYO 104,JAPAN
[2] KANAZAWA UNIV,SCH MED,DEPT SURG 2,KANAZAWA,ISHIKAWA 920,JAPAN
[3] CHAING MAI UNIV,FAC MED,CHIANG MAI 5000,THAILAND
[4] RAMATHIBODI HOSP,DEPT PATHOL,BANGKOK 10400,THAILAND
关键词
D O I
10.1099/0022-1317-76-9-2323
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
We examined 24 C-type hepatitis specimens from Thailand and detected hepatitis C virus (HCV) RNA in all of them by RT-nested PCR for a portion of the HCV 5' non-coding (5' NC) region and a portion of the HCV core region. However, we failed to detect HCV RNA in 11 specimens by RT-nested PCR for a portion in the non-structural protein 5 (NS5) region that has been used commonly for HCV genotyping. We designed a new primer set for a separate portion of the NS5 region. Using this primer set, we succeeded in amplifying this portion in all 24 specimens. Two novel HCV genotypes, tentatively designated HCV-VII and HCV-VIII, were identified by sequencing these amplified regions. Our newly designed primers for RT-nested PCR may be useful for diagnosing infection as well as for genotyping unidentified HCV genomes.
引用
收藏
页码:2323 / 2327
页数:5
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