Chromatin remodelling: the industrial revolution of DNA around histones

被引:433
作者
Saha, Anjanabha
Wittmeyer, Jacqueline
Cairns, Bradley R.
机构
[1] Univ Utah, Sch Med, Dept Oncol Sci, Huntsman Canc Inst, Salt Lake City, UT 84112 USA
[2] Univ Utah, Sch Med, Howard Hughes Med Inst, Huntsman Canc Inst, Salt Lake City, UT 84112 USA
关键词
D O I
10.1038/nrm1945
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Chromatin remodellers are specialized multi-protein machines that enable access to nucleosomal DNA by altering the structure, composition and positioning of nucleosomes. All remodellers have a catalytic ATPase subunit that is similar to known DNA-translocating motor proteins, suggesting DNA translocation as a unifying aspect of their mechanism. Here, we explore the diversity and specialization of chromatin remodellers, discuss how nucleosome modifications regulate remodeller activity and consider a model for the exposure of nucleosomal DNA that involves the use of directional DNA translocation to pump 'DNA waves' around the nucleosome.
引用
收藏
页码:437 / 447
页数:11
相关论文
共 129 条
[111]   Yeast Isw1p forms two separable complexes in vivo [J].
Vary, JC ;
Gangaraju, VK ;
Qin, J ;
Landel, CC ;
Kooperberg, C ;
Bartholomew, B ;
Tsukiyama, T .
MOLECULAR AND CELLULAR BIOLOGY, 2003, 23 (01) :80-91
[112]   Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism [J].
Velankar, SS ;
Soultanas, P ;
Dillingham, MS ;
Subramanya, HS ;
Wigley, DB .
CELL, 1999, 97 (01) :75-84
[113]   ATP-dependent chromatin-remodeling complexes [J].
Vignali, M ;
Hassan, AH ;
Neely, KE ;
Workman, JL .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (06) :1899-1910
[114]  
von Zelewsky T, 2000, DEVELOPMENT, V127, P5277
[115]   Brg1, the ATPase subunit of the SWI/SNF chromatin remodeling complex, is required for myeloid differentiation to granulocytes [J].
Vradii, D ;
Wagner, S ;
Doan, DN ;
Nickerson, JA ;
Montecino, M ;
Lian, JB ;
Stein, JL ;
Van Wijnen, AJ ;
Imbalzano, AN ;
Stein, GS .
JOURNAL OF CELLULAR PHYSIOLOGY, 2006, 206 (01) :112-118
[116]   Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation [J].
Wade, PA ;
Gegonne, A ;
Jones, PL ;
Ballestar, E ;
Aubry, F ;
Wolffe, AP .
NATURE GENETICS, 1999, 23 (01) :62-66
[117]   Polybromo protein BAF180 functions in mammalian cardiac chamber maturation [J].
Wang, Z ;
Zhai, WG ;
Richardson, JA ;
Olson, EN ;
Meneses, JJ ;
Firpo, MT ;
Kang, CH ;
Skarnes, WC ;
Tjian, R .
GENES & DEVELOPMENT, 2004, 18 (24) :3106-3116
[118]   Nucleosome mobilization catalysed by the yeast SWI/SNF complex [J].
Whitehouse, I ;
Flaus, A ;
Cairns, BR ;
White, MF ;
Workman, JL ;
Owen-Hughes, T .
NATURE, 1999, 400 (6746) :784-787
[119]   Evidence for DNA translocation by the ISWI chromatin-remodeling enzyme [J].
Whitehouse, I ;
Stockdale, C ;
Flaus, A ;
Szczelkun, MD ;
Owen-Hughes, T .
MOLECULAR AND CELLULAR BIOLOGY, 2003, 23 (06) :1935-1945
[120]   Structure, dynamics, and function of chromatin in vitro [J].
Widom, J .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 1998, 27 :285-327