共 111 条
RNA Interference Pathways in Fungi: Mechanisms and Functions
被引:168
作者:

Chang, Shwu-Shin
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机构:
Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA

Zhang, Zhenyu
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Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA

Liu, Yi
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Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA
机构:
[1] Univ Texas SW Med Ctr Dallas, Dept Physiol, Dallas, TX 75390 USA
来源:
ANNUAL REVIEW OF MICROBIOLOGY, VOL 66
|
2012年
/
66卷
关键词:
small noncoding RNA;
Schizosaccharomyces pombe;
Neurospora;
DOUBLE-STRANDED-RNA;
CHESTNUT BLIGHT FUNGUS;
NEUROSPORA-CRASSA;
UNPAIRED DNA;
CRYPTOCOCCUS-NEOFORMANS;
HISTONE MODIFICATION;
PATHOGENIC FUNGUS;
ANTIVIRAL DEFENSE;
GENE-EXPRESSION;
POLYMERASE-II;
D O I:
10.1146/annurev-micro-092611-150138
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
RNA interference (RNAi) is a conserved eukaryotic gene regulatory mechanism that uses small noncoding RNAs to mediate posttranscriptional/transcriptional gene silencing. The fission yeast Schizosaccharomyces pombe and the filamentous fungus Neurospora crassa have served as important model systems for RNAi research. Studies on these two organisms and other fungi have contributed significantly to our understanding of the mechanisms and functions of RNAi in eukaryotes. In addition, surprisingly diverse RNAi-mediated processes and small RNA biogenesis pathways have been discovered in fungi. In this review, we give an overview of different fungal RNAi pathways with a focus on their mechanisms and functions.
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页码:305 / 323
页数:19
相关论文
共 111 条
[1]
DCL-1 colocalizes with other components of the MSUD machinery and is required for silencing
[J].
Alexander, William G.
;
Raju, Namboori B.
;
Xiao, Hua
;
Hammond, Thomas M.
;
Perdue, Tony D.
;
Metzenberg, Robert L.
;
Pukkila, Patricia J.
;
Shiu, Patrick K. T.
.
FUNGAL GENETICS AND BIOLOGY,
2008, 45 (05)
:719-727

Alexander, William G.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Raju, Namboori B.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Biol Sci, Stanford, CA 94305 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Xiao, Hua
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Hammond, Thomas M.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Perdue, Tony D.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Metzenberg, Robert L.
论文数: 0 引用数: 0
h-index: 0
机构:
Calif State Univ Northridge, Dept Biol, Northridge, CA 91330 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Pukkila, Patricia J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Shiu, Patrick K. T.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA
[2]
A uniform system for microRNA annotation
[J].
Ambros, V
;
Bartel, B
;
Bartel, DP
;
Burge, CB
;
Carrington, JC
;
Chen, XM
;
Dreyfuss, G
;
Eddy, SR
;
Griffiths-Jones, S
;
Marshall, M
;
Matzke, M
;
Ruvkun, G
;
Tuschl, T
.
RNA,
2003, 9 (03)
:277-279

Ambros, V
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Bartel, B
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Bartel, DP
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Burge, CB
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Carrington, JC
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Chen, XM
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Dreyfuss, G
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Eddy, SR
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Griffiths-Jones, S
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Marshall, M
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Matzke, M
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Ruvkun, G
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA

Tuschl, T
论文数: 0 引用数: 0
h-index: 0
机构: Dartmouth Coll Sch Med, Dept Genet, Hanover, NH 03755 USA
[3]
Meiotic transvection in fungi
[J].
Aramayo, R
;
Metzenberg, RL
.
CELL,
1996, 86 (01)
:103-113

Aramayo, R
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV WISCONSIN,DEPT BIOMOL CHEM,MADISON,WI 53706 UNIV WISCONSIN,DEPT BIOMOL CHEM,MADISON,WI 53706

Metzenberg, RL
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV WISCONSIN,DEPT BIOMOL CHEM,MADISON,WI 53706 UNIV WISCONSIN,DEPT BIOMOL CHEM,MADISON,WI 53706
[4]
Characterization of interactions between and among components of the meiotic silencing by unpaired DNA machinery in Neurospora crassa using bimolecular fluorescence complementation
[J].
Bardiya, Nirmala
;
Alexander, William G.
;
Perdue, Tony D.
;
Barry, Edward G.
;
Metzenberg, Robert L.
;
Pukkila, Patricia J.
;
Shiu, Patrick K. T.
.
GENETICS,
2008, 178 (01)
:593-596

Bardiya, Nirmala
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Alexander, William G.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Perdue, Tony D.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Barry, Edward G.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Metzenberg, Robert L.
论文数: 0 引用数: 0
h-index: 0
机构:
Calif State Univ Northridge, Dept Biol, Northridge, CA 91330 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Pukkila, Patricia J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biol, Chapel Hill, NC 27599 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA

Shiu, Patrick K. T.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA Univ Missouri, Div Biol Sci, Columbia, MO 65211 USA
[5]
MicroRNAs: Genomics, biogenesis, mechanism, and function (Reprinted from Cell, vol 116, pg 281-297, 2004)
[J].
Bartel, David P.
.
CELL,
2007, 131 (04)
:11-29

Bartel, David P.
论文数: 0 引用数: 0
h-index: 0
机构: Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
[6]
Transcription and RNAi in heterochromatic gene silencing
[J].
Buehler, Marc
;
Moazed, Danesh
.
NATURE STRUCTURAL & MOLECULAR BIOLOGY,
2007, 14 (11)
:1041-1048

Buehler, Marc
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02445 USA Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02445 USA

Moazed, Danesh
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02445 USA Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02445 USA
[7]
Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing
[J].
Buhler, Marc
;
Verdel, André
;
Moazed, Danesh
.
CELL,
2006, 125 (05)
:873-886

Buhler, Marc
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA

Verdel, André
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA

Moazed, Danesh
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA Harvard Univ, Sch Med, Dept Cell Biol, Boston, MA 02115 USA
[8]
Transcriptional Scaffolds for Heterochromatin Assembly
[J].
Cam, Hugh P.
;
Chen, Ee Sin
;
Grewal, Shiv I. S.
.
CELL,
2009, 136 (04)
:610-614

Cam, Hugh P.
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Biochem & Mol Biol Lab, NIH, Bethesda, MD 20892 USA NCI, Biochem & Mol Biol Lab, NIH, Bethesda, MD 20892 USA

Chen, Ee Sin
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Biochem & Mol Biol Lab, NIH, Bethesda, MD 20892 USA NCI, Biochem & Mol Biol Lab, NIH, Bethesda, MD 20892 USA

Grewal, Shiv I. S.
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Biochem & Mol Biol Lab, NIH, Bethesda, MD 20892 USA NCI, Biochem & Mol Biol Lab, NIH, Bethesda, MD 20892 USA
[9]
MOLECULAR CHARACTERIZATION OF UPSTREAM REGULATORY SEQUENCES CONTROLLING THE PHOTOINDUCED EXPRESSION OF THE ALBINO-3 GENE OF NEUROSPORA-CRASSA
[J].
CARATTOLI, A
;
COGONI, C
;
MORELLI, G
;
MACINO, G
.
MOLECULAR MICROBIOLOGY,
1994, 13 (05)
:787-795

CARATTOLI, A
论文数: 0 引用数: 0
h-index: 0
机构: IST NAZL NUTR,UNITA NUTR SPERIMENTALE,I-00178 ROME,ITALY

COGONI, C
论文数: 0 引用数: 0
h-index: 0
机构: IST NAZL NUTR,UNITA NUTR SPERIMENTALE,I-00178 ROME,ITALY

MORELLI, G
论文数: 0 引用数: 0
h-index: 0
机构: IST NAZL NUTR,UNITA NUTR SPERIMENTALE,I-00178 ROME,ITALY

MACINO, G
论文数: 0 引用数: 0
h-index: 0
机构: IST NAZL NUTR,UNITA NUTR SPERIMENTALE,I-00178 ROME,ITALY
[10]
Origins and Mechanisms of miRNAs and siRNAs
[J].
Carthew, Richard W.
;
Sontheimer, Erik J.
.
CELL,
2009, 136 (04)
:642-655

Carthew, Richard W.
论文数: 0 引用数: 0
h-index: 0
机构:
Northwestern Univ, Dept Biochem Mol Biol & Cell Biol, Evanston, IL 60208 USA Northwestern Univ, Dept Biochem Mol Biol & Cell Biol, Evanston, IL 60208 USA

Sontheimer, Erik J.
论文数: 0 引用数: 0
h-index: 0
机构:
Northwestern Univ, Dept Biochem Mol Biol & Cell Biol, Evanston, IL 60208 USA Northwestern Univ, Dept Biochem Mol Biol & Cell Biol, Evanston, IL 60208 USA