High diversity of HIV type 1 in Algeria

被引:15
作者
Bouzeghoub, S
Jauvin, V
Recordon-Pinson, P
Garrigue, I
Amrane, A
Belabbes, EH
Fleury, HJ [1 ]
机构
[1] Univ Bordeaux 2, UPRES EA 2968, Virol Lab, Grp Hosp Pellegrin, F-33076 Bordeaux, France
[2] Inst Pasteur, Lab Natl Reference VIH SIDA, Algiers, Algeria
[3] Hop El Hadi Flici, Serv Malad Infect, Algiers, Algeria
关键词
D O I
10.1089/aid.2006.22.367
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
We have sequenced different genes of HIV-1 strains from infected individuals recruited in various geographic parts of Algeria; phylogenetic trees were constructed yielding molecular characterization of these strains. Subtype B accounts for 56% of the samples studied and is therefore the predominant subtype, particularly in the north part of the country; but there is a high diversity of the virus including CRF02_AG, CRF06_cpx, CRF02/CRF06 interrecombinants, and different other intersubtype and/or inter-CRF recombinants. The prevalence of these non-B viruses increases in the south part of Algeria that borders sub-Saharan African countries. The high diversity of HIV-1 in Algeria has implications for virological follow-up, resistance surveys, and vaccine
引用
收藏
页码:367 / 372
页数:6
相关论文
共 9 条
[1]   A complex human immunodeficiency virus type 1 A/G/J recombinant virus isolated from a seronegative patient with AIDS from Benin, West Africa [J].
Baldrich-Rubio, E ;
Anagonou, S ;
Stirrups, K ;
Lafia, E ;
Candotti, D ;
Lee, H ;
Allain, JP .
JOURNAL OF GENERAL VIROLOGY, 2001, 82 :1095-1106
[2]   Emergence of complex and diverse CRF02-AG/CRF06-cpx recombinant HIV type 1 strains in Niger, West Africa [J].
Mamadou, S ;
Vidal, N ;
Montavon, C ;
Ben, A ;
Djibo, A ;
Rabiou, S ;
Soga, G ;
Delaporte, E ;
Mboup, S ;
Peeters, M .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 2003, 19 (01) :77-82
[3]   HIV-1 superinfections in a cohort of commercial sex workers in Burkina Faso as assessed by an autologous heteroduplex mobility procedure [J].
Manigart, O ;
Courgnaud, V ;
Sanou, O ;
Valéa, D ;
Nagot, N ;
Meda, N ;
Delaporte, E ;
Peeters, M ;
Van De Perre, P .
AIDS, 2004, 18 (12) :1645-1651
[4]   Comparison of capillary electrophoresis sequencing with the new CEQ 2000 DNA Analysis System to conventional gel based systems for HIV drug resistance analysis [J].
Merel, P ;
Pellegrin, I ;
Garrigue, I ;
Caumont, A ;
Schrive, MH ;
Birac, V ;
Bonot, P ;
Fleury, H .
JOURNAL OF VIROLOGICAL METHODS, 2001, 98 (01) :9-16
[5]   HIV type 1 isolates from 200 untreated individuals in Ho Chi Minh City (Vietnam):: ANRS 1257 study.: Large predominance of CRF01_AE and presence of major resistance mutations to antiretroviral drugs [J].
Nguyen, THL ;
Recordon-Pinson, P ;
Pham, VH ;
Nguyen, TVU ;
Truong, TXL ;
Huynh, TT ;
Garrigue, I ;
Schrive, MH ;
Pellegrini, I ;
Lafon, ME ;
Aboulker, JP ;
Barré-Sinoussi, F ;
Fleury, HJ .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 2003, 19 (10) :925-928
[6]   Molecular epidemiology of HIV type 1 subtypes in Equatorial Guinea [J].
Ortiz, M ;
Sanchez, I ;
Gonzalez, MP ;
León, MI ;
Abeso, N ;
Asumu, E ;
García-Sáiz, A .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 2001, 17 (09) :851-855
[7]   The public health significance of HIV-1 subtypes [J].
Tatt, ID ;
Barlow, KL ;
Nicoll, A ;
Clewley, JP .
AIDS, 2001, 15 :S59-S71
[8]   Presence of key drug resistance mutations in isolates from untreated patients of Abidjan, Cote d'Ivoire: ANRS 1257 study [J].
Toni, TD ;
Recordon-Pinson, P ;
Minga, A ;
Ekouevi, D ;
Bonard, D ;
Bequet, L ;
Huet, C ;
Chenal, H ;
Rouet, F ;
Dabis, F ;
Lafon, ME ;
Salamon, R ;
Masquelier, B ;
Fleury, HJ .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 2003, 19 (08) :713-717
[9]   High genetic diversity of HIV-1 strains in Chad, West Central Africa [J].
Vidal, N ;
Koyalta, D ;
Richard, V ;
Lechiche, C ;
Ndinaromtan, T ;
Djimasngar, A ;
Delaporte, E ;
Peeters, M .
JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES, 2003, 33 (02) :239-246