HuPho: the human phosphatase portal

被引:49
作者
Liberti, Susanna [1 ]
Sacco, Francesca [1 ]
Calderone, Alberto [1 ]
Perfetto, Livia [1 ]
Iannuccelli, Marta [1 ]
Panni, Simona [1 ,2 ]
Santonico, Elena [1 ]
Palma, Anita [1 ]
Nardozza, Aurelio P. [1 ]
Castagnoli, Luisa [1 ]
Cesareni, Gianni [1 ,3 ]
机构
[1] Univ Roma Tor Vergata, Dept Biol, I-00173 Rome, Italy
[2] Univ Calabria, Dept Cell Biol, I-87036 Arcavacata Di Rende, Italy
[3] Fdn Santa Lucia, Res Inst, Rome, Italy
关键词
database; phosphatase substrates; phosphatases; phosphorylation; protein interaction; PROTEIN-TYROSINE PHOSPHATASES; MOLECULAR INTERACTION DATABASE; SERINE/THREONINE PHOSPHATASES; HUMAN GENOME; EYES ABSENT; MAP KINASE; UPDATE; DISEASE; DEPHOSPHORYLATION; KNOWLEDGEBASE;
D O I
10.1111/j.1742-4658.2012.08712.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Phosphatases and kinases contribute to the regulation of protein phosphorylation homeostasis in the cell. Phosphorylation is a key post-translational modification underlying the regulation of many cellular processes. Thus, a comprehensive picture of phosphatase function and the identification of their target substrates would aid a systematic approach to a mechanistic description of cell signalling. Here we present a website designed to facilitate the retrieval of information about human protein phosphatases. To this end we developed a search engine to recover and integrate information annotated in several publicly available web resources. In addition we present a text-mining-assisted annotation effort aimed at extracting phosphatase related data reported in the scientific literature. The HuPho (human phosphatases) website can be accessed at http://hupho.uniroma2.it.
引用
收藏
页码:379 / 387
页数:9
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