Off-resonance TROSY (R1ρ-R1) for quantitation of fast exchange processes in large proteins

被引:21
作者
Kempf, JG
Jung, JY
Sampson, NS
Loria, JP
机构
[1] Yale Univ, Dept Chem, New Haven, CT 06520 USA
[2] SUNY Stony Brook, Dept Chem, Stony Brook, NY 11794 USA
关键词
D O I
10.1021/ja037101s
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Current solution NMR experiments for characterizing conformational exchange processes in large proteins are limited to exchange rates ca. 500-3000 s-1. A TROSY-based constant relaxation time (R1ρ - R1) experiment is designed to extend this capability to measure motion with rates up to 105 s-1 in large macromolecules. The experiment combines off-resonance spin-lock rf fields, which provide access to the faster time-scale dynamics, with TROSY coherence selection, which extends the molecular-weight range available for study. When implemented on the 53-kDa dimeric enzyme triosephosphate isomerase, the experiment yielded substantial gains in signal-to-noise (up to 60%) over current experiments at modest static magnetic fields (14.1 T). The TROSY (R1ρ - R1) experiment should therefore be of general utility for investigation of fast conformational exchange events in large proteins. Copyright © 2003 American Chemical Society.
引用
收藏
页码:12064 / 12065
页数:2
相关论文
共 23 条
[1]   Pervasive conformational fluctuations on microsecond time scales in a fibronectin type III domain [J].
Akke, M ;
Liu, J ;
Cavanagh, J ;
Erickson, HP ;
Palmer, AG .
NATURE STRUCTURAL BIOLOGY, 1998, 5 (01) :55-59
[2]   Monitoring macromolecular motions on microsecond to millisecond time scales by R(1)rho-R(1) constant relaxation time NMR spectroscopy [J].
Akke, M ;
Palmer, AG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (04) :911-912
[3]   3D NMR experiments for measuring 15N relaxation data of large proteins:: Application to the 44 kDa ectodomain of SIV gp41 [J].
Caffrey, M ;
Kaufman, J ;
Stahl, SJ ;
Wingfield, PT ;
Gronenborn, AM ;
Clore, GM .
JOURNAL OF MAGNETIC RESONANCE, 1998, 135 (02) :368-372
[4]   SENSITIVITY IMPROVEMENT IN ISOTROPIC MIXING (TOCSY) EXPERIMENTS [J].
CAVANAGH, J ;
RANCE, M .
JOURNAL OF MAGNETIC RESONANCE, 1990, 88 (01) :72-85
[5]   DIRECT MEASUREMENTS OF THE DISSOCIATION-RATE CONSTANT FOR INHIBITOR-ENZYME COMPLEXES VIA THE T-1-RHO AND T-2 (CPMG) METHODS [J].
DAVIS, DG ;
PERLMAN, ME ;
LONDON, RE .
JOURNAL OF MAGNETIC RESONANCE SERIES B, 1994, 104 (03) :266-275
[6]   IMPROVED VERSIONS OF OFF-RESONANCE ROESY [J].
DESVAUX, H ;
BERTHAULT, P ;
BIRLIRAKIS, N ;
GOLDMAN, M ;
PIOTTO, M .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1995, 113 (01) :47-52
[7]   Enzyme dynamics during catalysis [J].
Eisenmesser, EZ ;
Bosco, DA ;
Akke, M ;
Kern, D .
SCIENCE, 2002, 295 (5559) :1520-1523
[8]   Using amide 1H and 15N transverse relaxation to detect millisecond time-scale motions in perdeuterated proteins:: Application to HIV-1 protease [J].
Ishima, R ;
Wingfield, PT ;
Stahl, SJ ;
Kaufman, JD ;
Torchia, DA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (40) :10534-10542
[9]  
Kempf JG, 2003, CELL BIOCHEM BIOPHYS, V37, P187
[10]   An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates [J].
Korzhnev, DM ;
Skrynnikov, NR ;
Millet, O ;
Torchia, DA ;
Kay, LE .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (36) :10743-10753