Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa

被引:192
作者
Choi, Dong-Sic [1 ,2 ]
Kim, Dae-Kyum [1 ,2 ]
Choi, Seng Jin [1 ,2 ]
Lee, Jaewook [1 ,2 ]
Choi, Jun-Pyo [1 ,2 ]
Rho, Sangchul [3 ]
Park, Sang-Hyun [4 ]
Kim, Yoon-Keun [1 ,2 ]
Hwang, Daehee [5 ]
Gho, Yong Song [1 ,2 ]
机构
[1] Pohang Univ Sci & Technol, Dept Life Sci, Pohang, South Korea
[2] Pohang Univ Sci & Technol, Div Mol & Life Sci, Pohang, South Korea
[3] Pohang Univ Sci & Technol, Sch Interdisciplinary Biosci & Bioengn, Pohang, South Korea
[4] Seoul Natl Univ, Dept Biol Sci, Seoul, South Korea
[5] Pohang Univ Sci & Technol, Dept Chem Engn, Pohang, South Korea
关键词
Microbiology; Outer membrane vesicles; Pseudomonas aeruginosa; Vaccine; GRAM-NEGATIVE BACTERIA; INNATE IMMUNE-RESPONSE; CYSTIC-FIBROSIS; SAMPLE PREPARATION; MASS-SPECTROMETRY; BETA-LACTAMASE; PROTEINS; IDENTIFICATIONS; PURIFICATION; INFECTIONS;
D O I
10.1002/pmic.201000212
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Pseudomonas aeruginosa, an opportunistic human bacterial pathogen, constitutively secretes outer membrane vesicles (OMVs) into the extracellular milieu. Although recent progress has revealed that OMVs are essential for pathogenesis of P. aeruginosa, their proteins have not been comprehensively analyzed so far. In this study, we identified 338 vesicular proteins with high confidence by five separate LC-MS/MS analyses. This global proteome profile provides a basis for future studies to elucidate the pathological functions of OMVs from P. aeruginosa.
引用
收藏
页码:3424 / 3429
页数:6
相关论文
共 42 条
[1]   Purification of outer membrane vesicles from Pseudomonas aeruginosa and their activation of an IL-8 response [J].
Bauman, Susanne J. ;
Kuehn, Meta J. .
MICROBES AND INFECTION, 2006, 8 (9-10) :2400-2408
[2]   X!!Tandem, an improved method for running X!Tandem in parallel on collections of commodity computers [J].
Bjornson, Robert D. ;
Carriero, Nicholas J. ;
Colangelo, Christopher ;
Shifinan, Mark ;
Cheung, Kei-Hoi ;
Miller, Perry L. ;
Williams, Kenneth .
JOURNAL OF PROTEOME RESEARCH, 2008, 7 (01) :293-299
[3]   Biogenesis of the gram-negative bacterial outer membrane [J].
Bos, Martine P. ;
Robert, Viviane ;
Tommassen, Jan .
ANNUAL REVIEW OF MICROBIOLOGY, 2007, 61 :191-214
[4]   Biogenesis of the gram-negative bacterial outer membrane [J].
Bos, MP ;
Tommassen, J .
CURRENT OPINION IN MICROBIOLOGY, 2004, 7 (06) :610-616
[5]   The APEX Quantitative Proteomics Tool: Generating protein quantitation estimates from LC-MS/MS proteomics results [J].
Braisted, John C. ;
Kuntumalla, Srilatha ;
Vogel, Christine ;
Marcotte, Edward M. ;
Rodrigues, Alan R. ;
Wang, Rong ;
Huang, Shih-Ting ;
Ferlanti, Erik S. ;
Saeed, Alexander I. ;
Fleischmann, Robert D. ;
Peterson, Scott N. ;
Pieper, Rembert .
BMC BIOINFORMATICS, 2008, 9 (1)
[6]   The MexJK efflux pump of Pseudomonas aeruginosa requires OprM for antibiotic efflux but not for efflux of triclosan [J].
Chuanchuen, R ;
Narasaki, CT ;
Schweizer, HP .
JOURNAL OF BACTERIOLOGY, 2002, 184 (18) :5036-5044
[7]   Chromosomal β-lactamase is packaged into membrane vesicles and secreted from Pseudomonas aeruginosa [J].
Ciofu, O ;
Beveridge, TJ ;
Kadurugamuwa, J ;
Walther-Rasmussen, J ;
Hoiby, N .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2000, 45 (01) :9-13
[8]   Pseudomonas aeruginosa Cystic Fibrosis isolates of similar RAPD genotype exhibit diversity in biofilm forming ability in vitro [J].
Deligianni, Elena ;
Pattison, Sally ;
Berrar, Daniel ;
Ternan, Nigel G. ;
Haylock, Richard W. ;
Moore, John E. ;
Elborn, Stuart J. ;
Dooley, James S. G. .
BMC MICROBIOLOGY, 2010, 10
[9]   Vaccines and immunotherapy against Pseudomonas aeruginosa [J].
Doering, Gerd ;
Pier, Gerald B. .
VACCINE, 2008, 26 (08) :1011-1024
[10]   Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry [J].
Elias, Joshua E. ;
Gygi, Steven P. .
NATURE METHODS, 2007, 4 (03) :207-214