The effect of local structural disruption on the yield of photochemical ligation between anthracene-oligonucleotide conjugates

被引:7
作者
Arslan, Pelin [1 ]
Ihara, Toshihiro [1 ,2 ]
Mukae, Motoko [1 ]
Jyo, Akinori [1 ]
机构
[1] Kumamoto Univ, Grad Sch Sci & Technol, Dept Appl Chem & Biochem, Kumamoto 8608555, Japan
[2] Japan Sci & Technol Agcy, PRESTO, Kawaguchi, Saitama 3320012, Japan
关键词
D O I
10.2116/analsci.24.173
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
The techniques of chemical ligation have attracted great attention as an alternative to enzymatic joining of DNA ends. Here we introduce the photoligation of anthracene-modified ODN conjugates through anthracene cyclodimer formation. The effect of the positions and the kinds of single base mismatch on the template was evaluated using eight templates with one-base displacements. We found out that the yield of the ligation was affected by mispairing in a positiondependent manner. Such results would be attributed to the disruption of the local structure at the ligation site
引用
收藏
页码:173 / 176
页数:4
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