Opportunities for genetic investigation afforded by Acinetobacter baylyi, a nutritionally versatile bacterial species that is highly competent for natural transformation

被引:86
作者
Young, DM [1 ]
Parke, D
Ornston, LN
机构
[1] Harvard Univ, Sch Med, Dept Microbiol & Mol Genet, Boston, MA 02115 USA
[2] Yale Univ, Dept Mol Cellular & Dev Biol, New Haven, CT 06520 USA
关键词
catabolism; genetic islands; mutation; transmembrane trafficking;
D O I
10.1146/annurev.micro.59.051905.105823
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The genetic and physiological properties of Acinetobacter baylyi strain ADP1 make it an inviting subject for investigation of the properties underlying its nutritional versatility. The organism possesses a relatively small genome in which genes for most catabolic functions are clustered in several genetic islands that, unlike pathogenicity islands, give little evidence of horizontal transfer. Coupling mutagenic polymerase chain reaction to natural transformation provides insight into how structure influences function in transporters, transcriptional regulators, and enzymes. With appropriate selection, mutants in which such molecules have acquired novel function may be obtained. The extraordinary competence of A. baylyi for natural transformation and the ease with which it expresses heterologous genes make it a promising platform for construction of novel metabolic systems. Steps toward this goal should take into account the complexity of existing pathways in which transmembrane trafficking plays a significant role.
引用
收藏
页码:519 / 551
页数:33
相关论文
共 214 条
[1]   The crystal structure of MarR, a regulator of multiple antibiotic resistance, at 2.3 Å resolution [J].
Alekshun, MN ;
Levy, SB ;
Mealy, TR ;
Seaton, BA ;
Head, JF .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (08) :710-714
[2]   Alteration of the repressor activity of MarR, the negative regulator of the Escherichia coli marRAB locus, by multiple chemicals in vitro [J].
Alekshun, MN ;
Levy, SB .
JOURNAL OF BACTERIOLOGY, 1999, 181 (15) :4669-4672
[3]   Type IV pili-related natural transformation systems: DNA transport in mesophilic and thermophilic bacteria [J].
Averhoff, B ;
Friedrich, A .
ARCHIVES OF MICROBIOLOGY, 2003, 180 (06) :385-393
[4]   GENETIC-ANALYSIS OF SUPRAOPERONIC CLUSTERING BY USE OF NATURAL TRANSFORMATION IN ACINETOBACTER-CALCOACETICUS [J].
AVERHOFF, B ;
GREGGJOLLY, L ;
ELSEMORE, D ;
ORNSTON, LN .
JOURNAL OF BACTERIOLOGY, 1992, 174 (01) :200-204
[5]   An exocellular protein from the oil-degrading microbe Acinetobacter venetianus RAG-1 enhances the emulsifying activity of the polymeric bioemulsifier emulsan [J].
Bach, H ;
Berdichevsky, Y ;
Gutnick, D .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (05) :2608-2615
[6]   Unique features revealed by the genome sequence of Acinetobacter sp ADP1, a versatile and naturally transformation competent bacterium [J].
Barbe, V ;
Vallenet, D ;
Fonknechten, N ;
Kreimeyer, A ;
Oztas, S ;
Labarre, L ;
Cruveiller, S ;
Robert, C ;
Duprat, S ;
Wincker, P ;
Ornston, LN ;
Weissenbach, J ;
Marlière, P ;
Cohen, GN ;
Médigue, C .
NUCLEIC ACIDS RESEARCH, 2004, 32 (19) :5766-5779
[7]   Biodiversity of an Acinetobacter population isolated from activated sludge [J].
Barberio, C ;
Fani, R .
RESEARCH IN MICROBIOLOGY, 1998, 149 (09) :665-673
[8]   AN ATYPICAL STRAIN OF SPOROTHRIX FROM SOUTH AFRICA [J].
BRANDT, FA ;
VANNIEKE.V .
JOURNAL OF PATHOLOGY AND BACTERIOLOGY, 1968, 96 (01) :39-&
[9]   A STUDY OF MORAXELLA GROUP .2. OXIDATIVE-NEGATIVE SPECIES (GENUS ACINETOBACTER) [J].
BAUMANN, P ;
DOUDOROFF, M ;
STANIER, RY .
JOURNAL OF BACTERIOLOGY, 1968, 95 (05) :1520-+
[10]   Acinetobacter spp, as nosocomial pathogens: Microbiological, clinical, and epidemiological features [J].
BergogneBerezin, E ;
Towner, KJ .
CLINICAL MICROBIOLOGY REVIEWS, 1996, 9 (02) :148-+