Synthetic, biofunctional nucleic acid-based molecular devices

被引:25
作者
Bhatia, Dhiraj [1 ]
Sharma, Suruchi [1 ]
Krishnan, Yamuna [1 ]
机构
[1] GKVK, Tata Inst Fundamental Res, Natl Ctr Biol Sci, Bangalore 560065, Karnataka, India
基金
英国惠康基金;
关键词
3-DIMENSIONAL DNA NANOSTRUCTURES; DOUBLE-CROSSOVER MOLECULES; ORGANIC-SYNTHESIS; RATIONAL DESIGN; IN-VIVO; NANOSCALE; APTAMERS; JUNCTIONS; SENSORS; NANOTECHNOLOGY;
D O I
10.1016/j.copbio.2011.05.004
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Structural DNA nanotechnology seeks to create architectures of highly precise dimensions using the physical property that short lengths of DNA behave as rigid rods and the chemical property of Watson-Crick base-pairing that acts as a specific molecular glue with which such rigid rods may be joined. Thus DNA has been used as a molecular scale construction material to make molecular devices that can be broadly classified under two categories (i) rigid scaffolds and (ii) switchable architectures. This review details the growing impact of such synthetic nucleic acid based molecular devices in biology and biotechnology. Notably, a significant trend is emerging that integrates morphology-rich nucleic acid motifs and alternative molecular glues into DNA and RNA architectures to achieve biological functionality.
引用
收藏
页码:475 / 484
页数:10
相关论文
共 82 条
[1]   Modular access to structurally switchable 3D discrete DNA assemblies [J].
Aldaye, Faisal A. ;
Sleiman, Hanadi F. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (44) :13376-+
[2]   Fluorogenic DNAzyme Probes as Bacterial Indicators [J].
Ali, M. Monsur ;
Aguirre, Sergio D. ;
Lazim, Hadeer ;
Li, Yingfu .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2011, 50 (16) :3751-3754
[3]   Self-assembly of a nanoscale DNA box with a controllable lid [J].
Andersen, Ebbe S. ;
Dong, Mingdong ;
Nielsen, Morten M. ;
Jahn, Kasper ;
Subramani, Ramesh ;
Mamdouh, Wael ;
Golas, Monika M. ;
Sander, Bjoern ;
Stark, Holger ;
Oliveira, Cristiano L. P. ;
Pedersen, Jan Skov ;
Birkedal, Victoria ;
Besenbacher, Flemming ;
Gothelf, Kurt V. ;
Kjems, Jorgen .
NATURE, 2009, 459 (7243) :73-U75
[4]   DNA nanomachines [J].
Bath, Jonathan ;
Turberfield, Andrew J. .
NATURE NANOTECHNOLOGY, 2007, 2 (05) :275-284
[5]   Translational control of localized mRNAs: restricting protein synthesis in space and time [J].
Besse, Florence ;
Ephrussi, Anne .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2008, 9 (12) :971-980
[6]   A synthetic icosahedral DNA-based host-cargo complex for functional in vivo imaging [J].
Bhatia, Dhiraj ;
Surana, Sunaina ;
Chakraborty, Saikat ;
Koushika, Sandhya P. ;
Krishnan, Yamuna .
NATURE COMMUNICATIONS, 2011, 2
[7]   Icosahedral DNA Nanocapsules by Modular Assembly [J].
Bhatia, Dhiraj ;
Mehtab, Shabana ;
Krishnan, Ramya ;
Indi, Shantinath S. ;
Basu, Atanu ;
Krishnan, Yamuna .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2009, 48 (23) :4134-4137
[8]   Combining use of a panel of ssDNA aptamers in the detection of Staphylococcus aureus [J].
Cao, Xiaoxiao ;
Li, Shaohua ;
Chen, Liucun ;
Ding, Hongmei ;
Xu, Hua ;
Huang, Yanping ;
Li, Jie ;
Liu, Nongle ;
Cao, Weihong ;
Zhu, Yanjun ;
Shen, Beifen ;
Shao, Ningsheng .
NUCLEIC ACIDS RESEARCH, 2009, 37 (14) :4621-4628
[9]   Crystal structure of a group I ribozyme domain: Principles of RNA packing [J].
Cate, JH ;
Gooding, AR ;
Podell, E ;
Zhou, KH ;
Golden, BL ;
Kundrot, CE ;
Cech, TR ;
Doudna, JA .
SCIENCE, 1996, 273 (5282) :1678-1685
[10]   The poly dA helix: a new structural motif for high performance DNA-based molecular switches [J].
Chakraborty, Saikat ;
Sharma, Suruchi ;
Maiti, Prabal K. ;
Krishnan, Yamuna .
NUCLEIC ACIDS RESEARCH, 2009, 37 (09) :2810-2817