The origin of the dynamic transition in proteins

被引:151
作者
Khodadadi, S. [1 ]
Pawlus, S. [1 ,2 ]
Roh, J. H. [3 ,4 ]
Sakai, V. Garcia [5 ]
Mamontov, E. [5 ]
Sokolov, A. P. [1 ]
机构
[1] Univ Akron, Dept Polymer Sci, Akron, OH 44325 USA
[2] Silesian Univ, Inst Phys, PL-40007 Katowice, Poland
[3] Univ Maryland, Dept Mat Sci & Engn, College Pk, MD 20742 USA
[4] Johns Hopkins Univ, Dept Biophys, Baltimore, MD 21218 USA
[5] Rutherford Appleton Lab, ISIS Facil, Didcot OX11 0QX, Oxon, England
基金
美国国家科学基金会;
关键词
D O I
10.1063/1.2927871
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Despite extensive efforts in experimental and computational studies, the microscopic understanding of dynamics of biological macromolecules remains a great challenge. It is known that hydrated proteins, DNA and RNA, exhibit a so-called "dynamic transition." It appears as a sharp rise of their mean-squared atomic displacements < r(2)> at temperatures above 200-230 K. Even after a long history of studies, this sudden activation of biomolecular dynamics remains a puzzle and many contradicting models have been proposed. By combining neutron and dielectric spectroscopy data, we were able to follow protein dynamics over an extremely broad frequency range. Our results show that there is no sudden change in the dynamics of the protein at temperatures around similar to 200-230 K. The protein's relaxation time exhibits a smooth temperature variation over the temperature range of 180-300 K. Thus the experimentally observed sharp rise in < r(2)> is just a result of the protein's structural relaxation reaching the limit of the experimental frequency window. The microscopic mechanism of the protein's structural relaxation remains unclear. (c) 2008 American Institute of Physics.
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页数:5
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