The Microbe browser for comparative genomics

被引:3
作者
Gattiker, Alexandre [1 ,2 ]
Dessimoz, Christophe [1 ,3 ]
Schneider, Adrian [1 ,3 ]
Xenarios, Ioannis [1 ,4 ]
Pagni, Marco [1 ,4 ]
Rougemont, Jacques [1 ,2 ]
机构
[1] Ecole Polytech Fed Lausanne, SIB, CH-1015 Lausanne, Switzerland
[2] Ecole Polytech Fed Lausanne, Sch Life Sci, CH-1015 Lausanne, Switzerland
[3] ETH, Inst Computat Sci, CH-8092 Zurich, Switzerland
[4] Univ Lausanne, Vital IT, CH-1015 Lausanne, Switzerland
关键词
D O I
10.1093/nar/gkp268
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Microbe browser is a web server providing comparative microbial genomics data. It offers comprehensive, integrated data from GenBank, RefSeq, UniProt, InterPro, Gene Ontology and the Orthologs Matrix Project (OMA) database, displayed along with gene predictions from five software packages. The Microbe browser is daily updated from the source databases and includes all completely sequenced bacterial and archaeal genomes. The data are displayed in an easy-to-use, interactive website based on Ensembl software. The Microbe browser is available at http://microbe.vital-it.ch/. Programmatic access is available through the OMA application programming interface (API) at http://microbe.vital-it.ch/api.
引用
收藏
页码:W296 / W299
页数:4
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