Interactions of a Tetraanionic Porphyrin with DNA: from a Z-DNA Sensor to a Versatile Supramolecular Device

被引:110
作者
D'Urso, Alessandro [2 ]
Mammana, Angela [2 ]
Balaz, Milan [5 ]
Holmes, Andrea E. [4 ]
Berova, Nina [3 ]
Lauceri, Rosaria [1 ]
Purrello, Roberto [2 ]
机构
[1] CNR, Ist Biostrutture & Bioimmagini, Sez Catania, I-95125 Catania, Italy
[2] Univ Catania, Dipartimento Sci Chim, I-95125 Catania, Italy
[3] Columbia Univ, Dept Chem, New York, NY 10027 USA
[4] Doane Coll, Dept Chem, Crete, NE 68333 USA
[5] Univ Wyoming, Dept Chem, Laramie, WY 82071 USA
基金
美国国家科学基金会;
关键词
B-DNA; CIRCULAR-DICHROISM; TRANSITION; BINDING; THERMODYNAMICS; COMPLEXES; ADENOSINE; ADAR1;
D O I
10.1021/ja808099u
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The anionic nickel(II) porphyrin NiTPPS is able to selectively sense the spermine induced left-handed Z-form of DNA while it is completely silent in the presence of right-handed B-DNA. Interactions between the DNA and the porphyrin can be easily modulated by pH and temperature. The resulting Z-DNA-porphyrin-spermine complex behaves as a supramolecular reversible information storage system and as a reversible AND logic gate.
引用
收藏
页码:2046 / +
页数:4
相关论文
共 23 条
[1]   THERMODYNAMICS OF SIMPLE AND MIXED COMPLEXES OF COPPER(II) WITH ADENOSINE 5'-MONOPHOSPHATE AND SPERMINE [J].
ANTONELLI, ML ;
BALZAMO, S ;
CARUNCHIO, V ;
CERNIA, E ;
PURRELLO, R .
JOURNAL OF INORGANIC BIOCHEMISTRY, 1988, 32 (03) :153-161
[2]   Porphyrins conjugated to DNA as CD reporters of the salt-induced B to Z-DNA transition [J].
Balaz, M ;
Li, BC ;
Steinkruger, JD ;
Ellestad, GA ;
Nakanishi, K ;
Berova, N .
ORGANIC & BIOMOLECULAR CHEMISTRY, 2006, 4 (10) :1865-1867
[3]   A cationic zinc porphyrin as a chiroptical probe for Z-DNA [J].
Balaz, M ;
De Napoli, M ;
Holmes, AE ;
Mammana, A ;
Nakanishi, K ;
Berova, N ;
Purrello, R .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2005, 44 (26) :4006-4009
[4]   CHIRAL PROBES FOR THE HANDEDNESS OF DNA HELICES - ENANTIOMERS OF TRIS(4,7-DIPHENYLPHENANTHROLINE)RUTHENIUM(II) [J].
BARTON, JK ;
BASILE, LA ;
DANISHEFSKY, A ;
ALEXANDRESCU, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (07) :1961-1965
[5]   THERMODYNAMICS OF THE B TO Z TRANSITION IN POLY(M5DG-DC) [J].
CHAIRES, JB ;
STURTEVANT, JM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (15) :5479-5483
[6]   Polyamine-dependent gene expression [J].
Childs, AC ;
Mehta, DJ ;
Gerner, EW .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2003, 60 (07) :1394-1406
[7]   INTERACTION OF DNA WITH A PORPHYRIN LIGAND - EVIDENCE FOR INTERCALATION [J].
FIEL, RJ ;
HOWARD, JC ;
MARK, EH ;
DATTAGUPTA, N .
NUCLEIC ACIDS RESEARCH, 1979, 6 (09) :3093-3118
[8]   The role of binding domains for dsRNA and Z-DNA in the in vivo editing of minimal substrates by ADAR1 [J].
Herbert, A ;
Rich, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (21) :12132-12137
[9]   LEFT-HANDED DNA INVIVO [J].
JAWORSKI, A ;
HSIEH, WT ;
BLAHO, JA ;
LARSON, JE ;
WELLS, RD .
SCIENCE, 1987, 238 (4828) :773-777
[10]  
Kim YG, 2000, J BIOL CHEM, V275, P26828