Instability of miRNA and cDNAs derivatives in RNA preparations

被引:50
作者
Bravo, Valia [1 ]
Rosero, Samuel [1 ]
Ricordi, Camillo [1 ]
Pastori, Ricardo L. [1 ]
机构
[1] Univ Miami, Leonard M Miller Sch Med, Diabet Res Inst, Miami, FL 33136 USA
关键词
microRNA isolation; microRNA stability; quantification of microRNAs; miRNA cDNA stability;
D O I
10.1016/j.bbrc.2006.12.135
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Micro RNAs (miRNAs) are small RNA molecules, which function as important regulators of gene expression. We found that RNA preparation methods commonly utilized for miRNA expression studies yield highly unstable miRNAs. We studied the stability of four miRNAs belonging to different miRNAs families. A significant degradation of these molecules may be observed already three days after RNA isolation. Moreover, the respective cDNAs are highly unstable as well. Our findings indicate that instability of miRNAs and their cDNAs should be considered when designing miRNA expression studies. (c) 2007 Published by Elsevier Inc.
引用
收藏
页码:1052 / 1055
页数:4
相关论文
共 16 条
  • [1] The functions of animal microRNAs
    Ambros, V
    [J]. NATURE, 2004, 431 (7006) : 350 - 355
  • [2] MicroRNAs: Genomics, biogenesis, mechanism, and function (Reprinted from Cell, vol 116, pg 281-297, 2004)
    Bartel, David P.
    [J]. CELL, 2007, 131 (04) : 11 - 29
  • [3] Real-time quantification of microRNAs by stem-loop RT-PCR
    Chen, CF
    Ridzon, DA
    Broomer, AJ
    Zhou, ZH
    Lee, DH
    Nguyen, JT
    Barbisin, M
    Xu, NL
    Mahuvakar, VR
    Andersen, MR
    Lao, KQ
    Livak, KJ
    Guegler, KJ
    [J]. NUCLEIC ACIDS RESEARCH, 2005, 33 (20) : e179.1 - e179.9
  • [4] CHOMCZYNSKI P, 1987, ANAL BIOCHEM, V162, P156, DOI 10.1016/0003-2697(87)90021-2
  • [5] Transcription and processing of human microRNA precursors
    Cullen, BR
    [J]. MOLECULAR CELL, 2004, 16 (06) : 861 - 865
  • [6] Griffen TD, 2004, J INDO-EUR STUD, V32, P11
  • [7] MicroRNA biogenesis: Coordinated cropping and dicing
    Kim, VN
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2005, 6 (05) : 376 - 385
  • [8] Identification of novel genes coding for small expressed RNAs
    Lagos-Quintana, M
    Rauhut, R
    Lendeckel, W
    Tuschl, T
    [J]. SCIENCE, 2001, 294 (5543) : 853 - 858
  • [9] Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    Lewis, BP
    Burge, CB
    Bartel, DP
    [J]. CELL, 2005, 120 (01) : 15 - 20
  • [10] MiRNAs on the move: miRNA biogenesis and the RNAi machinery
    Murchison, EP
    Hannon, GJ
    [J]. CURRENT OPINION IN CELL BIOLOGY, 2004, 16 (03) : 223 - 229