The Pfam protein families database

被引：1359

作者：

Finn, Robert D. ^{[1
]}

Tate, John ^{[1
]}

Mistry, Jaina ^{[1
]}

Coggill, Penny C. ^{[1
]}

Sammut, Stephen John ^{[1
]}

Hotz, Hans-Rudolf ^{[1
]}

Ceric, Goran ^{[2
]}

Forslund, Kristoffer ^{[3
]}

Eddy, Sean R. ^{[2
]}

Sonnhammer, Erik L. L. ^{[3
]}

Bateman, Alex ^{[1
]}

机构：

[1] Wellcome Trust Sanger Inst, Hinxton, Cambs, England

[2] Howard Hughes Med Inst, Ashburn, VA 20147 USA

[3] Stockholm Univ, Stockholm Bioinformat Ctr, Albanova, SE-10691 Stockholm, Sweden

来源：

NUCLEIC ACIDS RESEARCH | 2008年 / 36卷

基金：

英国生物技术与生命科学研究理事会; 英国医学研究理事会;

关键词：

D O I：

10.1093/nar/gkm960

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Pfam is a comprehensive collection of protein domains and families, represented as multiple sequence alignments and as profile hidden Markov models. The current release of Pfam ( 22.0) contains 9318 protein families. Pfam is now based not only on the UniProtKB sequence database, but also on NCBI GenPept and on sequences from selected metage-nomics projects. Pfam is available on the web from the consortium members using a new, consistent and improved website design in the UK (http://pfam.sanger.ac.uk/), the USA (http://pfam.janelia.org/) and Sweden (http://pfam.sbc.su.se/), as well as from mirror sites in France (http://pfam.jouy.inra.fr/) and South Korea (http://pfam.ccbb.re.kr/).

引用

页码：D281 / D288

页数：8

共 20 条

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